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Table 1 GA Metabolic pathway genes in grape berry

From: Genome-wide identification and characterization of gibberellin metabolic and signal transduction (GA MST) pathway mediating seed and berry development (SBD) in grape (Vitis vinifera L.)

Name

Accession no.

Family

Chrom

Gene start

Gene end

Gene length

Gene strand

VvGA20ox1-B1

VIT_215s0046g02550

2OG-Fe (II) oxygenase

chr15

19,336,280

19,337,354

987

+

VvGA20ox1-B2

VIT_216s0050g00640

2OG-Fe (II) oxygenase

chr16

17,592,866

17,594,861

984

–

VvGA20ox1–1

VIT_203s0063g01150

2OG-Fe (II) oxygenase

chr3

4,642,814

4,644,285

1029

–

VvGA20ox1–2

VIT_202s0234g00010

2OG-Fe (II) oxygenase

chr2

11,691

13,858

1074

–

VvGA20ox1–3

VIT_209s0002g05290

2OG-Fe (II) oxygenase

chr9

5,011,954

5,013,413

936

–

VvGA20ox2–1

VIT_218s0001g01390

2OG-Fe (II) oxygenase

chr18

1,982,611

1,985,550

1137

–

VvGA20ox2–2

VIT_215s0048g01320

2OG-Fe (II) oxygenase

chr15

15,453,736

15,455,160

1155

+

VvGA20ox2–3

VIT_204s0044g01520

2OG-Fe (II) oxygenase

chr4

23,110,636

23,112,150

1128

–

VvGA20ox2–4

VIT_204s0044g01650

2OG-Fe (II) oxygenase

chr4

23,382,366

23,384,136

1134

–

VvGA20ox3–1

VIT_209s0002g05280

2OG-Fe (II) oxygenase

chr9

5,008,806

5,010,211

945

–

VvGA20ox3–2

VIT_209s0002g05320

2OG-Fe (II) oxygenase

chr9

5,054,916

5,056,221

942

–

VvGA20ox

VIT_216s0022g02310

2OG-Fe (II) oxygenase

chr16

14,861,534

14,863,137

1149

–

VvGA3ox1–1

VIT_209s0002g05340

2OG-Fe (II) oxygenase

chr9

5,075,023

5,077,440

951

–

VvGA3ox1–2

VIT_204s0008g04940

2OG-Fe (II) oxygenase

chr4

4,431,414

4,432,859

1068

–

VvGA3ox1–3

VIT_209s0002g05300

2OG-Fe (II) oxygenase

chr9

5,037,560

5,040,878

1080

–

VvGA3ox1–4

VIT_209s0002g05270

2OG-Fe (II) oxygenase

chr9

4,993,458

4,995,066

1098

+

VvGA3ox3

VIT_209s0002g05350

2OG-Fe (II) oxygenase

chr9

5,095,320

5,096,737

954

–

VvGA3ox4–1

VIT_204s0008g04920

2OG-Fe (II) oxygenase

chr4

4,415,690

4,418,033

951

+

VvGA3ox4–2

VIT_204s0044g02010

2OG-Fe (II) oxygenase

chr4

23,794,890

23,796,653

897

–

VvGA3ox4–3

VIT_202s0025g03440

2OG-Fe (II) oxygenase

chr2

2,939,781

2,941,071

966

+

VvGA2ox1–1

VIT_219s0140g00120

2OG-Fe (II) oxygenase

chr19

15,497,747

15,499,547

972

+

VvGA2ox1–2

VIT_213s0067g01150

2OG-Fe (II) oxygenase

chr13

635,013

637,333

1149

+

VvGA2ox1–3

VIT_219s0140g00140

2OG-Fe (II) oxygenase

chr19

15,603,314

15,604,866

999

+

VvGA2ox2–1

VIT_205s0077g00520

2OG-Fe (II) oxygenase

chr5

343,963

346,779

1020

–

VvGA2ox2–2

VIT_207s0005g01920

2OG-Fe (II) oxygenase

chr7

4,377,229

4,379,446

1002

+

VvGA2ox2–3

VIT_209s0002g05310

2OG-Fe (II) oxygenase

chr9

5,051,513

5,052,701

813

–

VvGA2ox8–1

VIT_201s0010g01650

2OG-Fe (II) oxygenase

chr1

17,965,019

17,969,123

1092

–

VvGA2ox8–2

VIT_219s0177g00030

2OG-Fe (II) oxygenase

chr19

5,864,515

5,868,916

1104

–

VvGA2ox8–3

VIT_210s0116g00410

2OG-Fe (II) oxygenase

chr10

190,070

195,160

1035

–

VvGA2ox8–4

VIT_206s0004g06790

2OG-Fe (II) oxygenase

chr6

7,476,208

7,478,569

1014

+

VvGA2ox

VIT_210s0003g03490

2OG-Fe (II) oxygenase

chr10

5,846,605

5,848,332

1002

+