Identification of SNPs and InDels associated with berry size in table grapes integrating genetic and transcriptomic approaches

Table 2 Summary of eight InDels with association to berry fresh weight (BFW), derived from transcriptomic approach based on seedless segregants exhibiting contrasting phenotypes for berry weight. All of them were validated in RxS segregants and grapevine varieties as well

InDel_ID	Chr	Change type	Effect	Gene_ID	Description
TSRNAINDELS120073669	6	DEL	Intragenic	Vitvi06g01581	Holocarboxylase synthetase
TSRNAINDELS120073728	6	DEL	Intragenic	Vitvi06g00050	Mitochondrial 2-oxoglutarate/malate carrier protein
TSRNAINDELS120073761	6	DEL	Intron	VviMYB5B	Transcription repressor MYB5
TSRNAINDELS120073788	6	DEL	Intragenic	Vitvi06g00063	Pheophorbide a oxygenase chloroplastic
TSRNAINDELS120095050	9	INS	Intragenic	Vitvi09g01251	Probable serine incorporator
TSRNAINDELS120095636	9	DEL	Intragenic	Vitvi09g01457	YTH domain family protein 2
TSRNAINDELS120095711	9	DEL	Frame_shift	Vitvi09g01486	Unknown Protein Function
TSRNAINDELS120025818	15	INS	Downstream	Vitvi15g00647	Beta-fructofuranosidase (invertase)

ISSN: 1471-2229