Table 3 Proteins unique for the nuclear samples of healthy potato leaves
From: Nuclear proteome of virus-infected and healthy potato leaves
Accession | Description (Solanum tuberosum Group Phureja DM1–3)a | Description (Blast2Go search)b | PSM valuec (healthy) | PSM valuec (PVA-infected) | Groupd | ||
|---|---|---|---|---|---|---|---|
Score_H1 | Score_H2 | Score_H3 | |||||
PGSC0003DMP400016511 | Dnajc14 protein | homeobox protein Hox-A10 | 1 | 2 | 1 | 0 | H3P0 |
PGSC0003DMP400012698 | Histone H2B | histone H2B | 48 | 102 | 0 | 0 | H2P0 |
PGSC0003DMP400040333 | Calreticulin | calreticulin-3-like isoform X1 | 0 | 8 | 6 | 0 | H2P0 |
PGSC0003DMP400051884 | Pinin/SDK/memA protein | pinin | 0 | 4 | 4 | 0 | H2P0 |
PGSC0003DMP400027372 | Class II knotted-like homeobox protein | homeobox protein knotted-1-like 3 isoform X2 | 0 | 4 | 3 | 0 | H2P0 |
PGSC0003DMP400048828 | Splicing factor | splicing factor 3B subunit 1 | 0 | 4 | 2 | 0 | H2P0 |
PGSC0003DMP400022318 | RNA binding protein | heterogeneous nuclear ribonucleoprotein 1 | 1 | 0 | 5 | 0 | H2P0 |
PGSC0003DMP400026205 | U1 small nuclear ribonucleoprotein 70 kDa | U1 small nuclear ribonucleoprotein 70 kDa | 2 | 0 | 1 | 0 | H2P0 |
PGSC0003DMP400054431 | Elongation factor P (EF-P) | elongation factor P | 0 | 1 | 2 | 0 | H2P0 |
PGSC0003DMP400031700 | Elongation factor TuA, chloroplastic | elongation factor TuA, chloroplastic | 0 | 6 | 7 | 0 | H2P0 |
PGSC0003DMP400022105 | PGR5 1A, chloroplastic | PGR5-like protein 1B, chloroplastic | 0 | 2 | 2 | 0 | H2P0 |
PGSC0003DMP400006029 | 60S ribosomal protein L12 | 60S ribosomal protein L12 | 2 | 5 | 8 | 4 | H3P1 |
PGSC0003DMP400034967 | Glycoprotein | 60S ribosomal protein L14–1 | 2 | 3 | 7 | 6 | H3P1 |
PGSC0003DMP400044310 | Small nuclear ribonucleoprotein polypeptide | small nuclear ribonucleoprotein E-like | 1 | 7 | 2 | 2 | H3P1 |
PGSC0003DMP400002893 | Snakin-2 | snakin-2 | 1 | 1 | 6 | 8 | H3P1 |
PGSC0003DMP400034062 | Nucleic acid binding protein | RNA-binding protein 2-like isoform X1 | 2 | 1 | 1 | 5 | H3P1 |