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Table 2 Proteins unique for the nuclear samples of PVA-infected potato leaves

From: Nuclear proteome of virus-infected and healthy potato leaves

Accession Description (Solanum tuberosum Group Phureja DM1–3)a Description (Blast2GO search)b PSM valuec (PVA-infected) PSM valuec (healthy) Groupd
Score_P1 Score_P2 Score_P3
PGSC0003DMP400020209 Pre-mRNA-splicing factor SF2 serine arginine-rich-splicing factor sr34-like isoform ×1 3 5 1 0 H0P3
PGSC0003DMP400037788 60S ribosomal protein L8 60S ribosomal protein L8 1 2 2 0 H0P3
PGSC0003DMP400014216 60S ribosomal protein L12 60S ribosomal protein L12 0 8 8 0 H0P2
PGSC0003DMP400046977 Small nuclear ribonucleoprotein E small nuclear ribonucleoprotein E-like 7 6 0 0 H0P2
PGSC0003DMP400025902 Glycoprotein 60S ribosomal protein L14–1 3 8 0 0 H0P2
PGSC0003DMP400012614 60s acidic ribosomal protein 60S acidic ribosomal protein P2-like 2 3 0 0 H0P2
PGSC0003DMP400043902 Ribosomal protein S26 40S ribosomal protein S26–3-like 0 3 2 0 H0P2
PGSC0003DMP400047103 Ferritin ferritin-2, chloroplastic 0 3 2 0 H0P2
PGSC0003DMP400054155 Glutathione S-transferase probable glutathione S-transferase 0 3 2 0 H0P2
PGSC0003DMP400010248 RRNA-processing protein UTP23 rRNA-processing protein UTP23 homolog isoform X1 2 2 0 0 H0P2
PGSC0003DMP400043895 Splicing factor 3B subunit Splicing factor 3B subunit 5/RDS3 complex subunit 10 0 2 1 0 H0P2
PGSC0003DMP400007597 Serine/arginine-rich protein serine/arginine-rich SC35-like splicing factor SCL33 1 2 0 0 H0P2
PGSC0003DMP400017980 HCF106 sec-independent protein translocase protein TATB, chloroplastic 0 1 2 0 H0P2
PGSC0003DMP400049837 Microsomal signal peptidase 23 kDa subunit signal peptidase complex subunit 3B 0 1 2 0 H0P2
PGSC0003DMP400015542 Small GTP-binding protein ras-related protein RABE1a-like 0 1 2 0 H0P2
PGSC0003DMP400027641 60S ribosomal protein L13a 60S ribosomal protein L13a-4 1 0 2 0 H0P2
  1. aDescription (Solanum tuberosum Group Phureja DM1–3 Genome Annotation v3.4)
  2. bDescription (Blast2GO search against protein sequences)
  3. cThe number of Peptide Spectrum Matches (the total number of identified peptides matched for the protein). Score_P1-P3 indicate values for each three experiment
  4. dH0P3, proteins detected in all three PVA samples but no healthy sample; H0P2, proteins detected in two of three PVA samples but no healthy sample