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Table 5 Candidate genes were screened from the QTL regions

From: New quantitative trait locus (QTLs) and candidate genes associated with the grape berry color trait identified based on a high-density genetic map

QTLs

Gene ID

FPKM Value

Annotation

M1

M2

M3

M4

R1

R2

R3

R4

col-2-1

VIT_02s0033g00390

0.00

35.40

39.36

24.18

0.00

1.45

41.25

48.05

MYBA2

VIT_02s0033g00410

0.11

176.28

146.15

78.33

0.01

20.16

204.54

159.69

MYBA1

col-2-2

VIT_02s0154g00400

85.86

59.40

44.25

45.74

45.24

41.02

30.45

35.03

GRAS

VIT_02s0012g00630

22.56

18.46

19.15

16.81

18.36

10.22

22.13

16.38

MYB

VIT_02s0012g01040

2.19

29.44

18.33

12.11

1.61

3.37

21.91

5.48

NAC

VIT_02s0012g01320

52.25

48.77

40.05

71.81

70.10

74.29

63.87

57.63

bHLH

col-17-1

VIT_17s0000g07200

150.04

83.54

314.18

278.86

224.36

292.87

185.42

154.32

F3’H

VIT_17s0000g07300

96.00

151.94

120.97

135.43

97.58

107.45

125.44

135.29

H+-ATPase

VIT_17s0000g07510

190.96

80.01

107.42

154.60

62.70

91.82

123.71

156.61

MYB

VIT_17s0000g07820

80.06

142.61

95.25

62.96

58.91

55.41

109.85

97.68

LIM

VIT_17s0000g08150

6.96

2.00

3.83

18.75

3.89

1.91

6.45

28.34

bHLH

VIT_17s0000g09080

16.64

1.22

0.25

0.16

9.05

1.99

1.89

0.62

MYB

col-4-1

VIT_04s0079g00410

57.69

18.05

36.25

69.99

52.77

16.17

34.16

68.21

MYB

VIT_04s0079g00690

0.45

95.32

2385.51

1093.51

0.12

313.27

1928.82

2290.31

GST

col-4-2

VIT_04s0008g05210

87.14

13.28

6.77

4.20

21.54

16.60

29.24

5.30

HY5

col-6-1

VIT_06s0004g03160

178.49

223.40

207.39

161.10

74.80

52.02

117.12

121.43

S1Fa-like

col-11-2

VIT_11s0016g01890

18.42

9.24

5.25

8.52

10.02

4.81

10.21

12.00

MYB

VIT_11s0016g02070

0.25

0.05

1.42

3.99

0.31

1.04

0.17

10.37

bHLH

VIT_11s0016g02410

10.20

0.63

0.91

4.03

5.82

1.13

1.21

3.56

MYB