Genome-wide identification and integrated analysis of lncRNAs in rice backcross introgression lines (BC2F12)

BMC Plant Biology

Table 2 Prediction of lncRNA as miRNA precursor

miRNA ID	lncRNA ID	Alignment length (nt)	Alignment ratio	Location
miR162a	LTCONS_00029262^a	171	1	Chr2
miR166f	LTCONS_00014145^a	107	0.972	Chr10
miR169a	LTCONS_00001063^a	173	1	Chr1
miR394	LTCONS_00029635^a	110	1	Chr2
miR396c	LTCONS_00034708^a	141	1	Chr2
miR396c	LTCONS_00034707^a	141	1	Chr2
miR319b	LTCONS_00000824	197	1	Chr1
miR166k	LTCONS_00035053	127	1	Chr2
miR166h	LTCONS_00035053	119	1	Chr2
miR393b	LTCONS_00051533^a	132	0.977	Chr4
miR172d	LTCONS_00034806^a	130	1	Chr2
miR172d	LTCONS_00034805^a	130	1	Chr2
miR1430	LTCONS_00024512^a	139	0.958	Chr12
miR444b	LTCONS_00033178^a	138	1	Chr2
miR444b	LTCONS_00033177	138	1	Chr2
miR444d	LTCONS_00034231^a	143	1	Chr2
miR1848	LTCONS_00027106^a	69	0.921	Chr2
miR1850	LTCONS_00057871^a	133	0.985	Chr5
miR1428b	LTCONS_00007959^a	124	1	Chr1
miR1428d	LTCONS_00007959^a	124	0.919	Chr1
miR1846e	LTCONS_00081175^a	69	0.957	Chr9
miR1846e	LTCONS_00057746	69	0.928	Chr5
miR396f	LTCONS_00034891^a	176	1	Chr2
miR5083	LTCONS_00009921^a	380	1	Chr1

ISSN: 1471-2229