Fig. 5

YTH Domains and Y/P/Q-rich region in TaYTHs. a. Alignments of the YTH domains of TaYTHs. b. Frequency distribution of amino acids in YTH Domains of TaYTHs. The amino acids participating in binding of m6A RNA are indicated with black points below the sequence. The amino acids involved in cage formation are indicated with red points. Amino acids implicated in H bond formation with N1 hydrogen, N6 hydrogen, and 2′-OH group of m6A are indicated with black, red and blue stars, respectively. The numbers on X axis indicate the relative position of amino acids, and the numbers on Y axis represent the conservation of amino acids. The height of a letter indicates its relative frequency at the given position (X-axis) in the motif. c. Locations of Y/P/Q-rich regions in TaDFs and TaDCs