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Table 6 Twenty-one genes associated with the cultivar-specificity spectrum of biotype strains

From: Plant transcriptome analysis reveals specific molecular interactions between alfalfa and its rhizobial symbionts below the species level

Gene

Description

G3 (LL2 vs. QL2)

Q (WLP2 vs. LL1)

Medsa042668

ubiquitin1

5.8 a

3.5

Medsa090988

Transposon Ty3-I Gag-Pol polyprotein, partial

−4.5

−2.0

Medsa070600

subtilisin-like serine protease

−1.5

−1.1

Medsa033982

Sporozoite surface protein 2

−1.8

−1.5

Medsa017908

transcription factor bHLH100

−2.0

−2.0

Medsa054952

NADP-dependent glyceraldehyde-3-phosphate dehydrogenase

1.8

2.7

Medsa047698

Kunitz type trypsin inhibitor / Alpha-fucosidase

2.9

2.4

Medsa045026

hypothetical protein TSUD_339160

2.5

2.7

Medsa031174

hypothetical protein MTR_3g111095

−5.1

−5.8

Medsa033325

horseradish peroxidase-like protein

2.1

2.4

Medsa009230

DUF1442 family protein

−1.3

−1.6

Medsa041850

disease resistance protein (TIR-NBS-LRR class)

1.7

2.1

Medsa041941

disease resistance protein (TIR-NBS-LRR class)

3.5

4.0

Medsa088244

disease resistance protein (TIR-NBS-LRR class)

7.0

8.0

Medsa057523

disease resistance protein (TIR-NBS-LRR class)

4.6

2.5

Medsa024638

cytochrome P450 family ent-kaurenoic acid oxidase

2.6

4.0

Medsa003249

branched-chain amino acid aminotransferase

3.3

4.3

Medsa035785

alpha-amylase carboxy-terminal beta-sheet domain protein

−4.5

−6.7

Medsa017564

Unknown

7.5

3.9

Medsa033887

Unknown

−4.8

−3.7

Medsa049192

Unknown

9.2

12.1

  1. a Log2 (fold change) is the average value retrieved by RNA-seq analysis of three biological replicates of the M. sativa cvs. Gannong No. 3 (G3) and Qingshui (Q) upon inoculation of effective two-cultivars specific biotype (E2) and effective one-cultivar specific biotype (E1) strains