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Table 1 Putative FLAs in N. benthamiana

From: Fasciclin-like arabinogalactan gene family in Nicotiana benthamiana: genome-wide identification, classification and expression in response to pathogens

gene symbol

gene locus

gene position

chromosome location

strand

CDS(bp)

protein length(aa)

Pi

amino acids MW(kDa)

predicted localization

FAS

GPI

NbFLA1

Niben101Scf00321g04012.1

Niben101Scf00321

Niben101Scf00321:422864,423997

+

1131

377

6.59

40.64

Cell membrane

2

N

NbFLA2

Niben101Scf00509g01008.1

Niben101Scf00509

Niben101Scf00509:85642,90123

-

741

247

6.39

26.08

Cell membrane

1

Y

NbFLA3

Niben101Scf00550g00014.1

Niben101Scf00550

Niben101Scf00550:46882,55345

+

1290

430

6.25

44.48

Cell membrane

1

N

NbFLA4

Niben101Scf00788g03029.1

Niben101Scf00788

Niben101Scf00788:460812,461639

+

825

275

4.62

28.95

Cell membrane, Nucleus

1

Y

NbFLA5

Niben101Scf00788g03035.1

Niben101Scf00788

Niben101Scf00788:422620,423441

-

819

273

4.74

28.55

Cell membrane

1

Y

NbFLA6

Niben101Scf00861g07009.1

Niben101Scf00861

Niben101Scf00861:810031,815156

+

1218

406

6.40

44.96

Cell membrane

2

N

NbFLA7

Niben101Scf00905g07001.1

Niben101Scf00905

Niben101Scf00905:720138,720957

-

774

258

4.80

26.97

Cell membrane

1

Y

NbFLA8

Niben101Scf01037g09001.1

Niben101Scf01037

Niben101Scf01037:932298,933101

+

801

267

5.60

28.17

Cell membrane

1

Y

NbFLA9

Niben101Scf01484g00009.1

Niben101Scf01484

Niben101Scf01484:43042,48168

+

1377

459

5.75

50.65

Cell membrane

2

N

NbFLA10

Niben101Scf01535g01003.1

Niben101Scf01535

Niben101Scf01535:172831,175164

-

1485

495

5.74

52.32

Cell membrane

2

Y

NbFLA11

Niben101Scf01685g06002.1

Niben101Scf01685

Niben101Scf01685:654403,655458

+

1053

351

7.76

38.87

Cell membrane

2

N

NbFLA12

Niben101Scf01911g00001.1

Niben101Scf01911

Niben101Scf01911:36923,37669

-

744

248

5.81

26.08

Cell membrane

1

Y

NbFLA13

Niben101Scf02994g01012.1

Niben101Scf02994

Niben101Scf02994:128443,129519

-

1074

358

4.40

39.73

Cell membrane

1

N

NbFLA14

Niben101Scf03271g02005.1

Niben101Scf03271

Niben101Scf03271:311394,312206

+

810

270

6.42

28.36

Cell membrane

1

Y

NbFLA15

Niben101Scf03563g00015.1

Niben101Scf03563

Niben101Scf03563:164934,165737

+

801

267

5.60

28.20

Cell membrane

1

Y

NbFLA16

Niben101Scf03634g11004.1

Niben101Scf03634

Niben101Scf03634:1153543,1157457

-

1344

448

6.14

49.40

Cell membrane

2

N

NbFLA17

Niben101Scf03757g02001.1

Niben101Scf03757

Niben101Scf03757:197902,202071

+

1377

459

5.76

50.79

Cell membrane

2

N

NbFLA18

Niben101Scf04444g06007.1

Niben101Scf04444

Niben101Scf04444:678486,679736

-

1248

416

5.93

43.84

Cell membrane

2

Y

NbFLA19

Niben101Scf04650g07004.1

Niben101Scf04650

Niben101Scf04650:711081,712304

+

1221

407

5.90

43.86

Cell membrane

2

Y

NbFLA20

Niben101Scf04731g11005.1

Niben101Scf04731

Niben101Scf04731:1262184,1263224

+

1038

346

9.41

37.88

Cell membrane

1

N

NbFLA21

Niben101Scf04765g02001.1

Niben101Scf04765

Niben101Scf04765:276562,277732

+

1080

360

5.44

38.75

Cell membrane

1

N

NbFLA22

Niben101Scf04792g02004.1

Niben101Scf04792

Niben101Scf04792:334985,335740

-

753

251

6.83

27.01

Cell membrane

1

Y

NbFLA23

Niben101Scf04813g00014.1

Niben101Scf04813

Niben101Scf04813:66883,69262

+

1386

462

5.50

48.34

Cell membrane

2

N

NbFLA24

Niben101Scf04847g00009.1

Niben101Scf04847

Niben101Scf04847:65900,67150

-

1248

416

5.81

44.05

Cell membrane

2

Y

NbFLA25

Niben101Scf05372g02008.1

Niben101Scf05372

Niben101Scf05372:251290,251817

+

750

250

6.03

26.10

Cell membrane

1

Y

NbFLA26

Niben101Scf05486g01006.1

Niben101Scf05486

Niben101Scf05486:176110,176890

+

546

182

9.23

19.67

Cell membrane

1

Y

NbFLA27

Niben101Scf05486g01015.1

Niben101Scf05486

Niben101Scf05486:168069,168845

+

774

258

6.06

27.36

Cell membrane

1

Y

NbFLA28

Niben101Scf06087g12013.1

Niben101Scf06087

Niben101Scf06087:1272274,1275168

+

1146

382

9.77

41.13

Cell membrane

1

N

NbFLA29

Niben101Scf06123g01025.1

Niben101Scf06123

Niben101Scf06123:103339,104049

+

708

236

8.79

25.61

Cell membrane

1

Y

NbFLA30

Niben101Scf06193g02005.1

Niben101Scf06193

Niben101Scf06193:268833,269871

+

747

249

9.36

27.50

Cell membrane

1

N

NbFLA31

Niben101Scf06203g03009.1

Niben101Scf06203

Niben101Scf06203:290365,293147

-

1326

442

6.26

47.82

Cell membrane

2

N

NbFLA32

Niben101Scf08300g00008.1

Niben101Scf08300

Niben101Scf08300:60937,61692

+

753

251

8.59

26.95

Cell membrane

1

Y

NbFLA33

Niben101Scf11969g00007.1

Niben101Scf11969

Niben101Scf11969:32722,34415

+

741

247

6.39

26.13

Cell membrane

1

Y

NbFLA34

Niben101Scf12431g00010.1

Niben101Scf12431

Niben101Scf12431:1378,2604

+

1224

408

5.41

43.98

Cell membrane

2

Y

NbFLA35

Niben101Scf13776g02002.1

Niben101Scf13776

Niben101Scf13776:333230,335138

+

1068

356

4.29

39.38

Cell membrane

1

N

NbFLA36

Niben101Scf19479g00006.1

Niben101Scf19479

Niben101Scf19479:91773,104152

-

819

273

9.63

29.11

Cell membrane

1

N

NbFLA37

Niben101Scf22195g00016.1

Niben101Scf22195

Niben101Scf22195:62492,63565

+

1071

357

8.56

39.46

Cell membrane

1

N

NbFLA38

Niben101Scf32632g00003.1

Niben101Scf32632

Niben101Scf32632:7941,10147

+

1128

376

5.30

41.56

Cell membrane

1

N

  1. Notes: +: The mRNA sequence is positive strand; -: The mRNA sequence is negative strand; Y: The sequence has GPI signal; N: The sequence has no GPI signal.