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Table 1 Additive effect QTLs for important agronomic traits in a Lumai 14 × Shaanhan 8675 IL population

From: Mining the stable quantitative trait loci for agronomic traits in wheat (Triticum aestivum L.) based on an introgression line population

Trait

QTL

Environment

Marker

LOD

Additive effecta

PVE (%)b

PH

qPH-1B

E2

Xwmc134

3.31

−1.09

7.08

qPH-2A

E8

Xbarc5

2.56

−1.75

3.36

qPH-3A

E8

Xwmc169

6.04

8.71

8.34

qPH-4A

E5

Xwmc757

5.22

−2.30

2.05

qPH-5B

E5

Xbarc142

3.46

4.79

1.33

qPH-6A

E1, E2, E4, E5, E6, E7, E8

Xbarc3

6.99, 6.24, 7.13, 8.87, 12.91, 9.90, 6.16

2.27, 1.61, 2.19, 2.57, 2.35, 1.98, 2.32

17.18, 12.21, 3.22, 3.81, 22.70, 17.87, 8.81

SL

qSL-1A

E1, E3, E7

Xwmc312

2.96, 5.11, 3.62

0.20, 0.25, 0.23

6.38, 10.26, 7.89

qSL-1B

E2, E5

Xwmc134

3.41, 2.92

−0.21, − 0.18

8.70, 5.13

qSL-2A

E3, E4, E5, E6, E8

Xbarc5

3.56, 3.70, 6.52, 2.53, 5.78

−0.25, − 0.28, − 0.34, − 0.23, − 0.35

7.07, 6.74, 9.84, 4.76, 10.44

qSL-2B

E5

Xbarc128

4.35

1.21

6.49

qSL-6A

E1, E4, E6, E8

Xbarc3

4.47, 3.45, 3.89, 5.41

0.24, 0.22, 0.24, 0.28

10.00, 6.35, 7.59, 10.01

qSL-7A-1

E3

Xwmc525

3.57

0.8

7.20

qSL-7A-2

E1

Xwmc809

2.72

0.68

5.86

qSL-7D

E4, E5, E8

Xcfd14

2.54, 4.02, 2.86

0.20, 0.22, 0.21

4.55, 5.86, 4.95

HD

qHD-1A

E1, E2, E4, E5, E6, E8

Xbarc148

4.32, 3.39, 10.04, 9.49, 6.42, 3.85

−0.69, −0.50, −0.82, −0.73, −0.53, − 0.51

8.43, 7.07, 11.34, 12.42, 11.05, 6.76

qHD-1B

E5

Xwmc134

6.49

0.42

8.62

qHD-2D

E4, E5, E6, E7, E8

Xwmc144

4.19, 5.37, 6.48, 4.72, 2.99

−0.53, −0.56, − 0.55, − 0.65, − 0.47

5.21, 8.50, 11.09, 6.43, 4.93

GNS

qGNS-1A-1

E2

Xbarc148

5.48

3.29

8.80

qGNS-1A-2

E4

Xwmc716

5.73

9.60

5.46

qGNS-1B

E6

Xbarc81

2.74

1.71

3.10

qGNS-2D

E3, E4, E5

Xwmc144

3.29, 4.21, 2.67

−2.05, −2.08, −1.68

6.47, 4.09, 3.96

qGNS-4A

E4

Xwmc757

2.60

−1.45

2.44

qGNS-6B

E3

Xwmc737

2.79

7.18

5.14

qGNS-7A

E8

Xgwm635

4.21

2.64

6.86

TGW

qTGW-1B

E3

Xwmc134

2.72

−1.17

5.65

qTGW-2D

E4

Xwmc41

3.17

0.86

3.26

qTGW-6A-1

E4, E8

Xbarc3

4.00, 3.19

0.89, 1.05

4.05, 4.28

qTGW-6A-2

E5, E8

Xwmc201

7.97, 6.19

1.66, 1.40

12.13, 8.46

qTGW-7B

E8

Xbarc267

2.57

−1.81

3.30

NT

qNT-1B-1

E1

Xwmc134

2.64

0.21

5.19

qNT-1B-2

E5

Xbarc81

3.43

0.25

4.13

qNT-3B

E4

Xwmc787

3.01

0.67

3.19

qNT-5D

E6

Xgwm182

2.70

0.40

3.62

qNT-6A

E3, E7

Xwmc256

5.29, 4.22

−0.43, −0.21

7.15, 4.95

FSN

qFSN-1A

E8

Xbarc148

4.58

−0.31

5.46

qFSN-1B

E7

Xwmc134

2.87

0.22

4.59

qFSN-2B

E8

Xwmc592

5.75

1.49

7.14

qFSN-2D

E4

Xwmc41

2.50

0.22

2.56

qFSN-3A

E5

Xwmc532

6.99

1.65

6.72

qFSN-6A

E3

Xbarc3

2.72

−0.26

5.24

qFSN-7D

E1, E4, E8

Xcfd14

2.79, 3.69, 7.39

0.30, 0.25, 0.33

5.43, 3.46, 9.16

GWP

qGWP-1A

E2

Xbarc148

4.21

0.41

6.73

qGWP-4A

E4

Xwmc757

4.89

−0.40

4.44

qGWP-5D

E3

Xgwm292

2.89

0.95

4.51

  1. aPositive values indicate that ‘Shanhan 8675’ alleles increase the corresponding trait, and, conversely, negative values indicate that ‘Shanhan 8675’ alleles decrease it
  2. bPhenotypic variance explained by the additive QTL