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Table 1 Summaries of differentially expressed genes involved in phenylpropanoids-related pathway under PEG stress

From: Transcriptome and metabolite analysis reveal the drought tolerance of foxtail millet significantly correlated with phenylpropanoids-related pathways during germination process under PEG stress

Gene ID

CK2H vs. P2H (phase I)

CK8H vs. P8H (phase II)

CK14H vs. P14H (phase III)

Description

 

Fold change (Log2 ratio)

UP/ DOWN

FDR

Fold change (Log2 ratio)

UP/

DOWN

FDR

Fold change (Log2 ratio)

UP/ DOWN

FDR

 

Seita.1G065800

0.24

normal

1

−0.33

normal

0.05896

−1.04

down

6.63E-16

4-Coumarate--CoA ligase 3 OS=Oryza sativa subsp. japonica(Rice) (EC: 6.2.1.12)

Seita.1G240500

–

–

–

0.17

normal

1

−1.61

down

1.40E-07

Phenylalanine ammonia -lyase OS=Oryza sativa subsp. indica(Rice) (EC: 4.3.1.24)

Seita.1G361000

−0.06

normal

1

0.19

normal

1

−1.04

down

1.94E-06

Cinnamoyl-CoA reductase 1 OS=Arabidopsis thaliana(Mouse-ear cress) (EC: 1.2.1.44)

Seita.4G047200

−0.29

normal

1

−0.81

normal

0.15261

−1.07

down

7.49E-11

Shikimate O-hydroxycinnamoyl-transferase OS=Nicotiana tabacum(Common tobacco) (EC: 23.1.133)

Seita.9G492600

–

–

–

−0.51

normal

0.89386

−1.50

down

1.77E-08

Beta-glucosidase 6 (Precursor) OS=Oryza sativa subsp. japonica(Rice) (EC: 3.2.1.21)

Seita.1G023100

−0.15

normal

1

−0.66

normal

3.95E-08

−1.52

down

2.83E-33

Peroxidase 52 (Precursor) OS=Arabidopsis thaliana (EC: 1.11.1.7)

Seita.2G430900

–

–

–

−0.48

normal

0.90950

−1.68

down

5.45E-13

Peroxidase 70 (Precursor) OS=Zea mays (Maize) (EC: 1.11.1.7)

Seita.2G431100

–

–

–

−1.21

normal

0.22302

−1.70

down

1.36E-06

Peroxidase 66 (Precursor) OS=Zea mays (Maize) (EC: 1.11.1.7)

Seita.2G431200

–

–

–

−0.51

normal

1

−2.31

down

5.78E-11

Peroxidase 2 (Precursor) OS=Oryza sativa subsp. japonica (Rice) (EC: 1.11.1.7)

Seita.2G431300

–

–

–

–

–

–

−1.28

down

1.69E-06

Peroxidase 2 (Precursor) OS=Oryza sativa subsp. japonica (Rice) (EC: 1.11.1.7)

Seita.2G431500

–

–

–

–

–

–

− 1.59

down

0.00012

Peroxidase 66 (Precursor) OS=Zea mays (Maize) (EC: 1.11.1.7)

Seita.3G004800

−0.30

normal

1

−0.53

normal

0.22516

−2.05

down

5.87E-32

Cationic peroxidase SPC4 (Precursor) OS=Sorghum bicolor(Sorghum) (EC: 1.11.1.7)

Seita.3G234900

–

–

–

–

–

–

−4.21

down

0.00810

Peroxidase 15 (Precursor) OS=Ipomoea batatas (Sweet potato) (EC: 1.11.1.7)

Seita.3G235000

0.15

normal

1

−0.02

normal

1

−1.23

down

8.05E-11

Peroxidase 15 (Precursor) OS=Ipomoea batatas (Sweet potato) (EC: 1.11.1.7)

Seita.4G176700

−0.06

normal

1

−0.33

normal

0.86122

−1.61

down

6.80E-16

Peroxidase P7 OS=Brassica rapa subsp. rapa (Turnip) (EC: 1.11.1.7)

Seita.5G145500

–

–

–

−1.06

normal

0.01628

−1.08

down

4.17E-05

Peroxidase 4 (Precursor) OS=Vitis vinifera(Grape) (EC: 1.11.1.7)

Seita.7G271000

–

–

–

–

–

–

−2.07

down

1.49E-15

Peroxidase 1 (Precursor) OS=Zea mays (Maize) (EC: 1.11.1.7)

Seita.9G298300

–

–

–

–

–

–

−1.10

down

1.50E-06

Peroxidase 15 (Precursor) OS=Ipomoea batatas (Sweet potato) (EC: 1.11.1.7)

Seita.9G392700

–

–

–

–

–

–

−1.83

down

7.97E-11

Peroxidase 2 (Precursor) OS=Zea mays (Maize) (EC: 1.11.1.7)

Seita.9G478000

–

–

–

–

–

–

−1.37

down

2.72E-05

Peroxidase 15 (Precursor) OS=Ipomoea batatas (Sweet potato) (EC: 1.11.1.7)

  1. Bold text indicated the phenylpropanoids-related genes which had been analyzed by qPCR in this research
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BMC Plant Biology

ISSN: 1471-2229

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