Skip to main content

Table 4 Statistics of unigenes undergone positive selection effect in three blueberry species

From: Molecular footprints of selection effects and whole genome duplication (WGD) events in three blueberry species: detected by transcriptome dataset

Species

Intensity of positive

Species pairs

Number of unigenes

Number of unigenes annotated by GO database

Number of GO terms

Enriched Go term (p < 0.05)

KEGG annotation

Enrich KEGG (p < 0.05)

Ko ID [Enzyme ID]

T1

Strong

T1 Vs T2

13

1

4(4 M)

ND

0

0

ND

T1 Vs T3

15

3

5(5 M)

GO:0016772

0

0

ND

Shared

6

1

0

ND

0

0

ND

Weak

T1 Vs T2

4

3

16(3C + 2 M + 11B)

GO:0010506; GO:0031329; GO:0009894

0

0

ND

T1 Vs T3

6

4

66(15C + 51B)

ND

2

1

ko00660; ko00650; ko00290; ko00770; ko01210; ko01230 [2.2.1.6]

Shared

1

0

0

ND

0

0

ND

T2

Strong

T1 Vs T2

13

1

4(4 M)

ND

0

0

ND

T2 Vs T3

10

4

50(11 M + 31B + 8C)

ND

2

0

ND

Shared

2

0

0

ND

0

 

ND

Weak

T1 Vs T2

4

3

35(14C + 8 M + 13B)

GO:0010506; GO:0031329; GO:0009894

0

0

ND

T2 Vs T3

7

5

96(17C + 25 M + 54B)

GO:0010506;GO:0031329;GO:0016485;GO:0051604;GO:0009894

 

1

ko00900 [3.4.24.84]

Shared

1

1

0

ND

0

0

ND

T3

Strong

T1 Vs T3

15

3

5(5 M)

ND

0

0

ND

T2 Vs T3

10

4

51(8C + 12 M + 31B)

ND

2

0

ND

Shared

1

0

0

ND

0

0

ND

Weak

T1 Vs T3

6

4

88(15C + 23 M + 50B)

GO:0016744

2

1

ko00660; ko00650; ko00290

ko00770; ko01210; ko01230 [2.2.1.6]

T2 Vs T3

7

5

90(15C + 21 M + 54B)

GO:0010506; GO:0031329; GO:0009894; GO:0016485; GO:0051604

1

1

ko00900 [3.4.24.84]

Shared

0

0

0

ND

0

0

ND

  1. ND indicates no data; M represents “molecular function”; C represents “cellular component”; B represents “Biological process”
  2. T1, T2 and T3 indicate rabbiteye (V. virgatum), southern highbush (V. corymbosum × southern species), and northern highbush blueberry (V. corymbosum) species, respectively