Table 1 Proteins binding on the OsSHMT gene promoter from Dular and Lsi1-OX
Protein ID | Unique peptide number | Unique spectra number | Coverage | Description |
|---|---|---|---|---|
Dular, RT | ||||
LOC_Os03g58470.1 | 11 | 121 | 0.3481 | retrotransposon protein, putative, Ty3-gypsy subclass, expressed |
LOC_Os04g58730.1 | 4 | 6 | 0.1527 | AT hook motif domain containing protein, expressed |
LOC_Os03g03720.1 | 4 | 4 | 0.1261 | glyceraldehyde-3-phosphate dehydrogenase, putative, expressed |
LOC_Os12g37260.1 | 3 | 3 | 0.0434 | lipoxygenase 2.1, chloroplast precursor, putative, expressed |
LOC_Os11g47970.1 | 3 | 3 | 0.0687 | AAA-type ATPase family protein, putative, expressed |
LOC_Os04g42320.1 | 3 | 3 | 0.0414 | AT hook motif family protein, expressed |
LOC_Os07g08710.1 | 3 | 3 | 0.1871 | AT hook-containing DNA-binding protein, putative, expressed |
Dular, chilling | ||||
LOC_Os03g58470.1 | 10 | 130 | 0.3311 | retrotransposon protein, putative, Ty3-gypsy subclass, expressed |
LOC_Os04g58730.1 | 4 | 8 | 0.1527 | AT hook motif domain containing protein, expressed |
LOC_Os07g08710.1 | 4 | 9 | 0.223 | AT hook-containing DNA-binding protein, putative, expressed |
LOC_Os05g34170.2 | 4 | 7 | 0.1036 | tubulin/FtsZ domain containing protein, putative, expressed |
LOC_Os03g03720.2 | 3 | 4 | 0.1226 | glyceraldehyde-3-phosphate dehydrogenase, putative, expressed |
Lsi1-OX, RT | ||||
LOC_Os03g58470.1 | 10 | 145 | 0.3447 | retrotransposon protein, putative, Ty3-gypsy subclass, expressed |
LOC_Os04g42320.1 | 6 | 9 | 0.0674 | AT hook motif family protein, expressed |
LOC_Os01g72049.1 | 5 | 5 | 0.1975 | retrotransposon, putative, centromere-specific, expressed |
LOC_Os05g34170.2 | 3 | 4 | 0.0811 | tubulin/FtsZ domain containing protein, putative, expressed |
LOC_Os07g38730.1 | 2 | 2 | 0.0444 | tubulin/FtsZ domain containing protein, putative, expressed |
Lsi1-OX, chilling | ||||
LOC_Os03g58470.1 | 15 | 205 | 0.3823 | retrotransposon protein, putative, Ty3-gypsy subclass, expressed |
LOC_Os05g51850.1 | 8 | 8 | 0.1413 | AT hook-containing DNA-binding protein, putative, expressed |
LOC_Os04g58730.1 | 7 | 10 | 0.2506 | AT hook motif domain containing protein, expressed |
LOC_Os11g47970.1 | 6 | 6 | 0.1309 | AAA-type ATPase family protein, putative, expressed |
LOC_Os01g72049.1 | 6 | 6 | 0.1975 | retrotransposon, putative, centromere-specific, expressed |
LOC_Os04g42320.1 | 6 | 7 | 0.0721 | AT hook motif family protein, expressed |
LOC_Os07g08710.1 | 5 | 9 | 0.2662 | AT hook-containing DNA-binding protein, putative, expressed |
LOC_Os04g49990.1 | 4 | 5 | 0.2507 | AT hook motif domain containing protein, expressed |
LOC_Os05g34170.2 | 4 | 5 | 0.1059 | tubulin/FtsZ domain containing protein, putative, expressed |
LOC_Os08g40150.1 | 3 | 3 | 0.1102 | AT hook motif domain containing protein, expressed |
LOC_Os04g38600.2 | 3 | 3 | 0.1111 | glyceraldehyde-3-phosphate dehydrogenase, putative, expressed |
LOC_Os06g04020.1 | 3 | 3 | 0.1458 | histone H1, putative, expressed |
LOC_Os03g52490.1 | 2 | 2 | 0.098 | nucleic acid binding protein, putative, expressed |