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Table 3 Some target genes of alkaline-responsive lncRNAs related to photosynthetic carbon assimilation

From: Long non-coding RNAs in the alkaline stress response in sugar beet (Beta vulgaris L.)

Comparison group lncRNA ID P-value Target gene id Target gene description
ST_vs_C LNC_004949 −1.396038917 LOC104907718 photosystem I subunit O
LNC_004949 −1.396038917 LOC104897526 glucose-6-phosphate 1-dehydrogenase
LNC_007731 −1.126389158 LOC104897387 carbonic anhydrase 2
LNC_007731 −1.126389158 LOC104893033 glycerol-3-phosphate acyltransferase
LNC_007731 −1.126389158 LOC104902037 carbonic anhydrase
LNC_007731 −1.126389158 LOC104900039 photosystem II repair protein PSB27-H1
LNC_007731 −1.126389158 LOC104897526 glucose-6-phosphate 1-dehydrogenase
LT_vs_C LNC_000365 −1.291328691 LOC104902037 carbonic anhydrase
LNC_000365 −1.291328691 LOC104908971 magnesium protoporphyrin IX methyltransferase
LNC_000365 −1.291328691 LOC104890676 chloroplast stem-loop binding protein of 41 kDa b
LNC_000365 −1.291328691 LOC104889354 magnesium-chelatase subunit ChlH
LNC_000365 −1.291328691 LOC104900584 magnesium-chelatase subunit ChlI
LNC_000365 −1.291328691 LOC104889639 magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase
LNC_007731 −1.261549284 LOC104902037 carbonic anhydrase
LNC_007731 −1.261549284 LOC104889639 magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase
LNC_007731 −1.261549284 LOC104897526 glucose-6-phosphate 1-dehydrogenase