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Table 2 Pathways of differentially expressed unigenes annotated in KEGG

From: Transcriptome analyses provide insights into the homeostatic regulation of axillary buds in upland cotton (G. hirsutum L.)

NO.

Pathway annotated in KEGG

DEG number

Total number

P-value

Pathway ID

Level 1

Level 2

HB-E vs. LB-E

1

Plant hormone signal transduction

67

666

0.138944617

ko04075

Environmental Information Processing

Signal transduction

2

Photosynthesis

61

108

2.63445E-36

ko00195

Metabolism

Energy metabolism

3

Protein processing in endoplasmic reticulum

56

485

0.022169926

ko04141

Genetic Information Processing

Folding, sorting and degradation

4

DNA replication

36

86

1.97547E-16

ko03030

Genetic Information Processing

Replication and repair

5

Photosynthesis - antenna proteins

34

47

4.46141E-26

ko00196

Metabolism

Energy metabolism

HB-G1 vs. LB-G1

1

Protein processing in endoplasmic reticulum

25

485

2.21325E-05

ko04141

Genetic Information Processing

Folding, sorting and degradation

2

Plant hormone signal transduction

22

666

0.018159619

ko04075

Environmental Information Processing

Signal transduction

3

Photosynthesis

12

108

2.04012E-06

ko00195

Metabolism

Energy metabolism

4

MAPK signaling pathway - plant

12

353

0.058286698

ko04016

Environmental Information Processing

Signal transduction

5

Phenylpropanoid biosynthesis

11

320

0.063782317

ko00940

Metabolism

Biosynthesis of other secondary metabolites

HB-G2 vs. LB-G2

      

1

Plant hormone signal transduction

19

666

0.000772591

ko04075

Environmental Information Processing

Signal transduction

2

Diterpenoid biosynthesis

8

57

5.31481E-07

ko00904

Metabolism

Metabolism of terpenoids and polyketides

3

Amino sugar and nucleotide sugar metabolism

8

276

0.023594718

ko00520

Metabolism

Carbohydrate metabolism

4

Starch and sucrose metabolism

7

277

0.060857028

ko00500

Metabolism

Carbohydrate metabolism

5

Ascorbate and aldarate metabolism

6

91

0.001004811

ko00053

Metabolism

Carbohydrate metabolism

  1. “HB-E” and “LB-G” for “high-budding phenotype, early stage” and “low-budding, growth stage”, respectively