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Table 5 List of some of the differentially regulated genes encoding transcription factors in poco1. (The table belongs to the end of the sixth part of the result section “identification of genes associated with cellular regulation and signaling”)

From: Transcriptomic analysis of poco1, a mitochondrial pentatricopeptide repeat protein mutant in Arabidopsis thaliana

Gene name

Gene regulation

TF

Description

Reference

FBH2

 

bHLH

photoperiod-independent effect on flowering, over-expression line with an early-flowering phenotype

[85]

PRE1

  

bHLH

over-expression line with an early-flowering phenotype, gibberellic acid-dependent response

[86]

MYC2

  

bHLH

positive regulator of ABA signaling

[87]

MYB2

 

 

MYB

response to ABA, response to water deprivation

[88]

MYB20

 

 

MYB

positive regulator of ABA signaling

[89]

MYB32

  

MYB

response to ABA

[90, 91]

MYB51

  

MYB

response to ABA

[92]

MYB73

  

MYB

interaction with ABA signaling components

[93]

NAC089

  

NAC

negative regulation of flower development

[94]

RAV1

  

ERF

negative regulation of flower development

[95]

TEM1

  

RAV

FT repressor, mutants flower early, overexpression line flowers late

[95]

WRKY15

 

WRKY

early H2O2 responsive, over-expression line disrupts ROS and mitochondrial retrograde signaling

[96, 97]

WRKY25

  

WRKY

response to various abiotic stresses, ABA response, over-expression line shows ABA sensitivity

[98,99,100]

WRKY33

  

WRKY

response to various abiotic stresses, ABA response, over-expression line shows ABA sensitivity

[98,99,100]

WRKY46

  

WRKY

regulation of ABA signaling and response to water deprivation

[101]

  1. Gene regulation symbols from left to right refer to the regulation in pre-inflorescence-inflorescence, inflorescence-flowering and inflorescence-inflorescence respectively. Gene regulation symbols- ↑: up-regulation; ↓: down-regulation; TF- transcription factor