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Table 2 Some of differentially regulated genes in poco1 and their involvement in flowering. (The table belongs to the end of the third part of the result section “Affected genes associated with flowering”)

From: Transcriptomic analysis of poco1, a mitochondrial pentatricopeptide repeat protein mutant in Arabidopsis thaliana

Gene name

Gene regulation

Description

Reference

ACR4

  

up-regulated during floral induction in the apical meristem

[33]

Ankyrin

 

up-regulated during floral induction in the apical meristem

[33]

CRK6

 

ROS sensing, signaling, mutants flower early

[34]

CRK19

  

abiotic stress tolerance and hypersensitive response, mutants flower early

[34]

DGR2

  

up-regulated during floral induction in the apical meristem

[33]

ELF4-L1

  

circadian clock/photoperiod regulation of flowering, mutants flower early

[35]

FLN1

  

up-regulated during floral induction in the apical meristem

[33]

FLP1

 

 

floral induction, flowering time control, over-expression line flowers early

[36]

FRL

  

induction of FLC

[37,38,39,40]

FT

 

 

positive regulation of floral induction/flower development, mutants flower late

[41]

GA3ox1

  

gibberellic acid biosynthetic pathway

[42, 43]

GI

 

 

induction of flowering via the circadian clock/photoperiod, mutants flower late

[44]

GID1B

 

 

gibberellic acid signaling pathway

[45]

GRP7

 

 

regulation of flowering time, mutants flower late and over-expression line flowers early

[46]

PHYE

  

repressor of flowering, phototransduction, mutants flower early

[47, 48]

ROXY2

  

anther development

[49]

TRM112A

 

 

up-regulated during floral induction in the apical meristem

[33]

AT1G09390

  

up-regulated during floral induction in the apical meristem

[33]

AT5G56120

  

up-regulated during floral induction in the apical meristem

[33]

  1. Gene regulation symbols from left to right refer to the regulation in pre-inflorescence-inflorescence, inflorescence-flowering and inflorescence-inflorescence respectively. Gene regulation symbols- ↑: up-regulation; ↓: down-regulation