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Table 1 Characteristics of the markers most highly associated (peak SNPs) with lesion length

From: Genome-wide association mapping of Sclerotinia sclerotiorum resistance in soybean using whole-genome resequencing data

Chromosome (Chr)

Position

p-value

Resistant allele/susceptible allele

FDR

MAF

R2

Allelic effect (mm)

01

5,594,597

5.08 × 10−5

T/C

0.02

0.38

0.32

29

15

13,665,369

9.76 × 10−5

A/G

0.04

0.32

0.15

15

  1. Position: The physical position of the marker on the chromosome according to the G. max reference genome [Gmax_275 (Wm82.a2.v1)] [24]
  2. FDR False discovery rate
  3. MAF Minor allele frequency
  4. R2: Indicates the proportion of total phenotypic variation accounted for by the marker
  5. Allelic effect: average change in lesion length following allele substitution
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BMC Plant Biology

ISSN: 1471-2229

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