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Table 2 Molecular characterization of the amino acid permease (AAP) genes in Arabidopsis thaliana and Brassica napus

From: Genome-wide identification of the amino acid permease genes and molecular characterization of their transcriptional responses to various nutrient stresses in allotetraploid rapeseed

Gene IDGene nameBlockCDS (bp)Exon/
intron
Amino acid
(aa)
KaKsKa/KsDivergent time
(Mya)
At1g58360AtAAP1D14586/5485    
BnaA01g21750DBnaA1.AAP1D15246/55070.03940.39310.100213.10
BnaA03g59400DBnaA3.AAP1D16238/75400.05650.39870.141713.29
BnaA09g14700DBnaA9.AAP1D14406/54790.04660.40430.115313.48
BnaC01g42990DBnaC1.AAP1D15246/55070.04050.37470.108112.49
BnaC04g18440DBnaC4.AAP1D14556/54840.04890.38540.126912.85
BnaCnng25620DBnaCn.AAP1D14406/54790.04890.39650.123313.22
At5g09220AtAAP2R14826/5493    
BnaA03g02650DBnaA3.AAP2R14647/64870.02930.47070.062215.69
BnaA10g22670DBnaA10.AAP2R14586/54850.03660.50270.072816.76
BnaC03g03750DBnaC3.AAP2R14646/54870.03130.46760.066915.59
BnaC09g47230DBnaC9.AAP2R14586/54850.04370.47870.091315.96
At1g77380AtAAP3E14317/6476    
BnaA07g33510DBnaA7.AAP3E14317/64760.03740.39450.094813.15
BnaC06g38080DBnaC6.AAP3aE14317/64760.03860.38650.099912.88
BnaC06g38090DBnaC6.AAP3bE14317/64760.04080.38470.106112.82
At5g63850AtAAP4X14016/5466    
BnaA02g33930DBnaA2.AAP4X14016/54660.03040.54790.055518.26
BnaA06g22970DBnaA6.AAP4X14015/44660.03920.45670.085815.22
BnaC02g42740DBnaC2.AAP4X14015/44660.03060.53980.056717.99
BnaC03g50500DBnaC3.AAP4X14015/44660.04230.43670.096914.56
At1g44100AtAAP5C14435/4480    
BnaAnng17090DBnaAn.AAP5C12484/34150.08040.49640.162016.55
BnaA08g04440DBnaA8.AAP5C14465/44810.08400.54490.154218.16
BnaA05g18660DBnaA5.AAP5C14645/44870.08010.52040.153917.35
BnaA10g08840DBnaA10.AAP5C14315/44760.12060.50150.240516.72
BnaC06g00580DBnaC6.AAP5C14315/44760.11490.49090.234116.36
At5g49630AtAAP6W14466/5481    
BnaCnng14480DBnaCn.AAP6W14406/54790.05600.47560.117715.85
At5g23810AtAAP7Q14046/5467    
BnaA09g05130DBnaA9.AAP7Q14137/64700.10920.35430.308211.81
BnaC09g04700DBnaC9.AAP7Q10596/53520.11690.38130.306612.71
At1g10010AtAAP8A14286/5475    
BnaA06g38000DBnaA6.AAP8aA14016/54660.13870.49770.278716.59
BnaA06g38010DBnaA6.AAP8bA13896/54620.13850.58800.235519.60
BnaA09g57230DBnaA9.AAP8aA14466/54810.13870.49770.278716.59
BnaA09g57240DBnaA9.AAP8bA15846/55270.13850.58800.235519.60
BnaC05g49200DBnaC5.AAP8aA14107/64690.13610.54260.250818.09
BnaC05g49210DBnaC5.AAP8bA14496/54820.13850.58800.235519.60
BnaC08g42410DBnaC8.AAP8aA14466/54810.15080.22160.68057.39
BnaC08g42420DBnaC8.AAP8bA15157/65040.14630.53260.274717.75
BnaC08g42430DBnaC8.AAP8cA14466/54810.13210.52570.251317.52
  1. Note: CDS coding sequence, Ka non-synonymous nucleotide substitution rate, Ks synonymous nucleotide substitution rate