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Table 4 Genes up-regulated at least five-fold by TaZFP1B overexpression under drought stress

From: The barley stripe mosaic virus expression system reveals the wheat C2H2 zinc finger protein TaZFP1B as a key regulator of drought tolerance

Gene number #GeneAnnotationFold change
Transcription-related proteins
39TRIAE_CS42_3B_TGACv1_223209_AA0778000.3LSD1 zinc finger> 100
40TRIAE_CS42_5DL_TGACv1_434621_AA1438900.6Scarecrow-like protein> 100
41TRIAE_CS42_7BS_TGACv1_592226_AA1933690.4Transcriptional corepressor LEUNIG> 100
42TRIAE_CS42_3AS_TGACv1_212728_AA0702890.1Transcriptional regulator RABBIT EARS42,2
43TRIAE_CS42_3AL_TGACv1_195838_AA0654650.3Double-stranded RNA-binding protein 128,9
44TRIAE_CS42_4DL_TGACv1_343075_AA1129010.3Trihelix transcription factor GT-224,1
45TRIAE_CS42_3AL_TGACv1_196955_AA0663930.1Transcription factor PCF722,5
46TRIAE_CS42_1DL_TGACv1_061611_AA0199920.1DnaJ homolog subfamily B20,5
47TRIAE_CS42_6BS_TGACv1_514227_AA1657240.1B-box zinc finger protein19,7
48TRIAE_CS42_2DL_TGACv1_159186_AA0534130.1WRKY transcription factor 1218,4
49TRIAE_CS42_5BL_TGACv1_406061_AA1340040.1CBFIVd-B418,4
50TRIAE_CS42_2DL_TGACv1_159186_AA0534130.1WRKY transcription factor18,4
51TRIAE_CS42_2AL_TGACv1_095147_AA0307480.1Lateral organ boundaries transcription factor16,4
52TRIAE_CS42_5DL_TGACv1_435031_AA1445050.1Ocs element-binding factor14.2
53TRIAE_CS42_2BS_TGACv1_147417_AA0482900.1Zinc finger protein CONSTANS 1515,8
54TRIAE_CS42_1DL_TGACv1_062044_AA0207980.1Transcription factor bHLH 11215,1
55TRIAE_CS42_7AL_TGACv1_558337_AA1792520.4Zinc finger CCCH domain-containing protein14,2
56TRIAE_CS42_4DS_TGACv1_361293_AA1165150.6BTB/POZ domain-containing protein12,6
57TRIAE_CS42_1DL_TGACv1_064769_AA0235650.2DnaJ homolog subfamily C member11,9
58TRIAE_CS42_4AS_TGACv1_306719_AA1012420.1Homeobox-leucine zipper protein HOX1211,9
59TRIAE_CS42_2AS_TGACv1_113089_AA0351070.5Heterogeneous nuclear ribonucleoprotein 110,7
60TRIAE_CS42_3DS_TGACv1_271642_AA0904520.1Ethylene-responsive transcription factor CRF110,5
61TRIAE_CS42_7DS_TGACv1_624521_AA2061810.2Transcription factor bHLH 789,7
62TRIAE_CS42_1DS_TGACv1_080414_AA0247520.3DnaJ homolog subfamily B member9,4
63TRIAE_CS42_5DS_TGACv1_457055_AA1481570.1Zinc finger protein C2H2 type9,3
64TRIAE_CS42_5BS_TGACv1_424687_AA1391330.5Transcription factor bZIP8,2
65TRIAE_CS42_5BL_TGACv1_406061_AA1340050.1Dehydration-responsive element-binding protein7,4
66TRIAE_CS42_1DS_TGACv1_080938_AA0255890.1C3HC4 type zinc-finger (RING finger)6,9
67TRIAE_CS42_3B_TGACv1_224651_AA0799380.1Lateral organ boundaries transcription factor6,9
68TRIAE_CS42_5DL_TGACv1_437778_AA1467310.5Two-component response regulator6,7
69TRIAE_CS42_2DL_TGACv1_162669_AA0563320.1Cold-responsive protein COR14a6,2
70TRIAE_CS42_5BS_TGACv1_424687_AA1391330.3Transcription factor bZIP5,9
71TRIAE_CS42_4DL_TGACv1_345275_AA1152550.1Homeobox-leucine zipper protein HOX135,7
72TRIAE_CS42_7BS_TGACv1_592977_AA1946950.1Transcription factor bHLH HEC25,6
73TRIAE_CS42_7AS_TGACv1_569468_AA1816690.1C2-C2 zinc finger5,6
74TRIAE_CS42_7BL_TGACv1_577432_AA1875300.1VQ domain containing protein5,5
75TRIAE_CS42_5AL_TGACv1_375766_AA1226930.1CBF IVd-A225,2
76TRIAE_CS42_6DS_TGACv1_544607_AA1748880.1B-box zinc finger protein5,2
77TRIAE_CS42_3AL_TGACv1_195166_AA0645630.3Transcription factor bHLH875,1
Calcium binding protein, kinase or phosphatase
78TRIAE_CS42_7BS_TGACv1_594052_AA1955780.1Phytosulfokine receptor 184,1
79TRIAE_CS42_5DL_TGACv1_434773_AA1441380.1LRR receptor-like serine/threonine-protein kinase35,9
80TRIAE_CS42_4DS_TGACv1_362249_AA1178220.1Calmodulin CML214,8
81TRIAE_CS42_7BL_TGACv1_577549_AA1878500.1Serine/threonine protein kinase14,0
82TRIAE_CS42_2DS_TGACv1_177289_AA0572410.1EF-Hand type domain containing protein9,2
83TRIAE_CS42_6DL_TGACv1_527174_AA1700020.3Mitogen-activated protein kinase kinase kinase7,6
84TRIAE_CS42_7AL_TGACv1_559296_AA1799010.1Receptor-like protein kinase6,9
Stress-related proteins
85TRIAE_CS42_4AS_TGACv1_307024_AA1016270.3BTB/POZ domain-containing protein NPY4> 100
86TRIAE_CS42_2AL_TGACv1_093753_AA0286070.3Protein DJ-1 homolog D> 100
87TRIAE_CS42_U_TGACv1_641289_AA2090920.5Topless-related protein 1> 100
88TRIAE_CS42_3DS_TGACv1_272269_AA0918140.2Disease resistance protein RPM1> 100
89TRIAE_CS42_4AS_TGACv1_308773_AA1029400.2Pathogenesis-related protein> 100
90TRIAE_CS42_7AS_TGACv1_569748_AA1823280.2Cysteine synthase86,2
91TRIAE_CS42_5DL_TGACv1_433513_AA1415280.1Dehydrin DHN273,3
92TRIAE_CS42_4BS_TGACv1_328898_AA1095240.1Pentatricopeptide repeat containing protein67,2
93TRIAE_CS42_2DL_TGACv1_163849_AA0564640.1Wound induced protein57,4
94TRIAE_CS42_2AS_TGACv1_115694_AA0372890.2Cytochrome P450 family protein50,4
95TRIAE_CS42_5BL_TGACv1_406032_AA1339460.1Dehydrin DHN250,4
96TRIAE_CS42_2AL_TGACv1_095873_AA0315400.1Mediator of ABA-regulated dormancy 148,4
97TRIAE_CS42_2DL_TGACv1_160571_AA0551860.1Mediator of ABA-regulated dormancy 131,6
98TRIAE_CS42_7BS_TGACv1_592018_AA1928290.1Glutathione S-transferase27,3
99TRIAE_CS42_2DL_TGACv1_160490_AA0551070.1Wound-responsive family protein26,3
100TRIAE_CS42_5AL_TGACv1_376309_AA1235150.1Dehydrin DHN222,9
101TRIAE_CS42_5AL_TGACv1_374112_AA1190770.1Aspartic protease22,7
102TRIAE_CS42_4AL_TGACv1_290111_AA0981810.2Tetratricopeptide repeat protein17,4
103TRIAE_CS42_7DL_TGACv1_602552_AA1960450.1Tubby-like protein17,0
104TRIAE_CS42_6AS_TGACv1_486459_AA1561390.1Auxin-responsive protein SAUR16,9
105TRIAE_CS42_2DL_TGACv1_158690_AA0524470.1Late embryogenesis abundant protein14,7
106TRIAE_CS42_2DL_TGACv1_158690_AA0524470.1Late embryogenesis abundant protein14,6
107TRIAE_CS42_4DL_TGACv1_343378_AA1133790.1Defensin14,1
108TRIAE_CS42_5BL_TGACv1_404954_AA1316190.1Cinnamoyl-CoA reductase13,1
109TRIAE_CS42_7AS_TGACv1_569113_AA1807500.2BTB/POZ and MATH domain-containing protein13,1
110TRIAE_CS42_5DL_TGACv1_433130_AA1403020.1Stress responsive A/B barrel domain-containing protein12,9
111TRIAE_CS42_U_TGACv1_640759_AA2072760.14Cysteine proteinase superfamily protein12,5
112TRIAE_CS42_7AS_TGACv1_569033_AA1805230.1ACT domain repeat protein11,6
113TRIAE_CS42_4BL_TGACv1_320342_AA1036020.1Glycine-rich protein11,3
114TRIAE_CS42_5AL_TGACv1_376309_AA1235140.1Dehydrin DHN111,2
115TRIAE_CS42_4AL_TGACv1_293117_AA1000210.1Aspartic protease10,9
116TRIAE_CS42_6BS_TGACv1_513372_AA1639240.1F-box/kelch-repeat protein SKIP410,5
117TRIAE_CS42_1BL_TGACv1_030562_AA0094080.1Cytochrome P450 85A110,5
118TRIAE_CS42_6DS_TGACv1_542552_AA1724150.1Auxin-responsive protein SAUR7110,4
119TRIAE_CS42_5BL_TGACv1_406277_AA1343590.3Cysteine proteinase superfamily protein9,1
120TRIAE_CS42_7DS_TGACv1_621863_AA2028000.1Cytochrome c oxidase subunit 5B mitochondrial8,9
121TRIAE_CS42_5DL_TGACv1_434334_AA1434100.2F-box/kelch-repeat protein8,8
122TRIAE_CS42_5DL_TGACv1_435810_AA1455180.2Rhodanese-like domain-containing protein8,1
123TRIAE_CS42_5AL_TGACv1_376986_AA1242950.1Glutathione S-transferase7,8
124TRIAE_CS42_7BS_TGACv1_591856_AA1923720.1Aspartic protease7,5
125TRIAE_CS42_5DL_TGACv1_434499_AA1437000.1Pentatricopeptide repeat-containing protein7,2
126TRIAE_CS42_6AL_TGACv1_471352_AA1507530.3WD repeat-containing protein6,1
127TRIAE_CS42_6AL_TGACv1_471352_AA1507530.6WD repeat-containing protein6,1
128TRIAE_CS42_3B_TGACv1_223361_AA0780920.2Glutathione transferase GST5,8
129TRIAE_CS42_3AL_TGACv1_197123_AA0664910.3Universal stress protein PHOS325,7
130TRIAE_CS42_1BL_TGACv1_030249_AA0083800.1Universal stress protein PHOS325,7
131TRIAE_CS42_3AS_TGACv1_210945_AA0681930.1AAA-protein family5,5
132TRIAE_CS42_1AL_TGACv1_001038_AA0023900.1Universal stress protein PHOS5,5
133TRIAE_CS42_2AL_TGACv1_093314_AA0277190.2Heat shock protein5,3
134TRIAE_CS42_3DL_TGACv1_249203_AA0841110.1Abscisic stress-ripening protein5,3
135TRIAE_CS42_2AL_TGACv1_094123_AA0292860.2Elicitor responsive gene5,2
136TRIAE_CS42_6AS_TGACv1_487227_AA1569190.1Auxin-induced protein5,0
Oxidation-reduction process
137TRIAE_CS42_2DS_TGACv1_178485_AA0596270.1Peroxidase44,7
138TRIAE_CS42_4AL_TGACv1_290177_AA0982590.1Alcohol dehydrogenase ADH1A23,1
139TRIAE_CS42_7BL_TGACv1_576933_AA1860390.1Defensin19,0
140TRIAE_CS42_2AS_TGACv1_112531_AA0340030.1Flavin-containing monooxygenase18,9
141TRIAE_CS42_2DS_TGACv1_177840_AA0585640.1Peroxidase18,6
142TRIAE_CS42_2BS_TGACv1_146806_AA0473250.1Peroxidase15,9
143TRIAE_CS42_5AL_TGACv1_377290_AA1245640.4NADPH oxidase9,9
144TRIAE_CS42_2DL_TGACv1_160970_AA0555660.1Protochlorophyllide reductase A7,7
145TRIAE_CS42_2AL_TGACv1_096139_AA0317380.1Hyoscyamine 6-dioxygenase7,4
146TRIAE_CS42_5AL_TGACv1_376972_AA1242830.1Alcohol dehydrogenase ADH2H6,9
147TRIAE_CS42_2DL_TGACv1_158391_AA0517380.1FAD-dependent urate hydroxylase-like6,4
148TRIAE_CS42_2AL_TGACv1_096158_AA0317510.1Polyamine oxidase 46,0
149TRIAE_CS42_2AL_TGACv1_096643_AA0320430.1Galactose oxidase5,9
150TRIAE_CS42_7AS_TGACv1_570735_AA1840120.1Thiosulfate sulfurtransferase5,7
151TRIAE_CS42_1AL_TGACv1_002876_AA0045790.1Gibberellin 20 oxidase 25,5
152TRIAE_CS42_3AL_TGACv1_194843_AA0640510.2Selenium-binding protein5,4
153TRIAE_CS42_1BL_TGACv1_031952_AA0123300.2Thioredoxin protein5,0
Cell wall and membrane structure
154TRIAE_CS42_U_TGACv1_694116_AA2161830.1Xyloglucan endotransglucosylase/hydrolase> 100
155TRIAE_CS42_1AL_TGACv1_000357_AA0009840.1Pectinesterase26,8
156TRIAE_CS42_5AS_TGACv1_393897_AA1277020.1Expansin-B319,0
157TRIAE_CS42_5DL_TGACv1_433202_AA1405370.1Remorin8,2
158TRIAE_CS42_6DL_TGACv1_527336_AA1702400.1Protein WAX27,3
159TRIAE_CS42_5AS_TGACv1_394403_AA1280080.3Hydroxyproline-rich glycoprotein family protein7,2
Cell cycle
160TRIAE_CS42_2BL_TGACv1_130589_AA0414320.3Protein laz1> 100
161TRIAE_CS42_U_TGACv1_640759_AA2072760.14Cysteine proteinases superfamily protein12,5
162TRIAE_CS42_5BL_TGACv1_406277_AA1343590.3Cysteine proteinases superfamily protein9,1
163TRIAE_CS42_3DL_TGACv1_249314_AA0845060.3Mitotic spindle checkpoint protein MAD17,4
164TRIAE_CS42_1BL_TGACv1_030567_AA0094200.2Protein LOL17,3
165TRIAE_CS42_5AL_TGACv1_375766_AA1226930.1Protein LOL16,6
166TRIAE_CS42_2DS_TGACv1_177975_AA0588450.1Cyclin-D2–25,1
167TRIAE_CS42_3DS_TGACv1_271852_AA0909480.1Cell division cycle-associated protein5,0
Transporters
168TRIAE_CS42_3DL_TGACv1_250015_AA0860390.2GABA transporter 1> 100
169TRIAE_CS42_3DL_TGACv1_249597_AA0852170.3Bidirectional sugar transporter SWEET86,3
170TRIAE_CS42_2AL_TGACv1_093880_AA0288670.1Non-specific lipid-transfer protein16,2
171TRIAE_CS42_5DL_TGACv1_432929_AA1394800.5Heavy metal-associated isoprenylated protein 3210,4
172TRIAE_CS42_1DL_TGACv1_061859_AA0204490.1Non-specific lipid-transfer protein8,1
173TRIAE_CS42_3AL_TGACv1_195744_AA0653320.1Bidirectional sugar transporter SWEET6,5
174TRIAE_CS42_6DL_TGACv1_526901_AA1694680.2Bidirectional sugar transporter SWEET6,1
175TRIAE_CS42_1AL_TGACv1_003689_AA0051080.1Non-specific lipid-transfer protein6,0
176TRIAE_CS42_1DL_TGACv1_061102_AA0185280.1Non-specific lipid-transfer protein5,8
177TRIAE_CS42_7BS_TGACv1_593410_AA1951130.1Non-specific lipid-transfer protein5,6
Post-translational protein modification
178TRIAE_CS42_4DS_TGACv1_361658_AA1171150.4E3 ubiquitin-protein ligase ARI19,1
179TRIAE_CS42_3DS_TGACv1_272908_AA0926480.3E3 ubiquitin-protein ligase8,4
180TRIAE_CS42_1AL_TGACv1_000329_AA0009100.2Ubiquitin conjugation factor E4 protein7,9
181TRIAE_CS42_7BL_TGACv1_578537_AA1896750.2Dolichyl-diphosphooligosaccharide protein glycosyltransferase subunit DAD17,1
Carbohydrate metabolism-related proteins
182TRIAE_CS42_7BL_TGACv1_578713_AA1899080.1Glucan endo-1,3-beta-glucosidase 3> 100
183TRIAE_CS42_3AL_TGACv1_194492_AA0634060.2NADP-dependent malic enzyme> 100
184TRIAE_CS42_3DL_TGACv1_249576_AA0851790.4Beta-galactosidase79,1
185TRIAE_CS42_5DL_TGACv1_436125_AA1458320.1Beta-glucosidase53,9
186TRIAE_CS42_2AS_TGACv1_112777_AA0345080.1Transketolase32,4
187TRIAE_CS42_5BL_TGACv1_405377_AA1326060.1Phosphoglycerate mutase-like protein12,8
188TRIAE_CS42_2BL_TGACv1_131851_AA0432880.2Aldose 1-epimerase10,2
189TRIAE_CS42_3B_TGACv1_222532_AA0766530.4ATP synthase subunit beta6,6
190TRIAE_CS42_2DL_TGACv1_158102_AA0509180.1Phenolic glucoside malonyltransferase6,2
191TRIAE_CS42_5AS_TGACv1_392538_AA1260340.7GDP-L-galactose phosphorylase6,1
192TRIAE_CS42_1DL_TGACv1_061598_AA0199620.1Beta-galactosidase 74,7
Fatty acid metabolism-related proteins
193TRIAE_CS42_3AS_TGACv1_210886_AA0680800.3Sphingosine-1-phosphate lyase> 100
194TRIAE_CS42_1AS_TGACv1_019138_AA0061500.2GDSL esterase/lipase8,8
195TRIAE_CS42_1BL_TGACv1_030780_AA0100660.2Phospholipase D5,4
Nitrogen metabolism-related proteins
196TRIAE_CS42_4AS_TGACv1_307728_AA1023060.1Glutamine synthetase6,4
Others
197TRIAE_CS42_4DS_TGACv1_362426_AA1179710.6Cyclin-like F-box domain containing protein> 100
198TRIAE_CS42_1BS_TGACv1_050119_AA0167640.2Unknown protein> 100
199TRIAE_CS42_3AS_TGACv1_211314_AA0688450.2WPP domain-interacting tail-anchored protein> 100
200TRIAE_CS42_5DL_TGACv1_434415_AA1435460.1TolB-like domain containing protein94,1
201TRIAE_CS42_6DL_TGACv1_528348_AA1713440.1Unknown protein84,4
202TRIAE_CS42_5BL_TGACv1_406843_AA1350500.1Unknown protein58,7
203TRIAE_CS42_5DL_TGACv1_433372_AA1411340.1Tryptophan synthase alpha chain-like52,7
204TRIAE_CS42_1AS_TGACv1_019383_AA0065910.3Isovaleryl-CoA dehydrogenase39,6
205TRIAE_CS42_4DL_TGACv1_343143_AA1130470.1Unknown protein27,7
206TRIAE_CS42_5DL_TGACv1_435042_AA1445250.2Obg-like ATPase 127,1
207TRIAE_CS42_1AS_TGACv1_019803_AA0071620.1Cyclin-like F-box domain containing protein23,5
208TRIAE_CS42_2BL_TGACv1_130998_AA0421050.2Peptidylprolyl isomerase17,2
209TRIAE_CS42_3DL_TGACv1_250372_AA0867150.1Unknown protein15,9
210TRIAE_CS42_3AL_TGACv1_195382_AA0648850.1Unknown protein13,9
211TRIAE_CS42_4BL_TGACv1_322190_AA1069510.1Anthocyanidin 3-O-glucosyltransferase12,2
212TRIAE_CS42_4BL_TGACv1_321444_AA1060550.2Elongator complex protein 610,8
213TRIAE_CS42_5DL_TGACv1_433709_AA1420080.1Nitrile-specifier protein 110,1
214TRIAE_CS42_5AL_TGACv1_375015_AA1213930.1Actin-depolymerizing factor 109,7
215TRIAE_CS42_7DL_TGACv1_602612_AA1962750.1Arogenate dehydrogenase 29,4
216TRIAE_CS42_3DL_TGACv1_249368_AA0846860.1Peptidase C1A, papain family protein7,5
217TRIAE_CS42_5AL_TGACv1_375655_AA1225200.2deSI-like protein7,3
218TRIAE_CS42_3B_TGACv1_224606_AA0798680.1Aromatic-ring hydroxylase domain containing protein7,1
219TRIAE_CS42_5BL_TGACv1_404868_AA1313220.1Nitrile-specifier protein 15,9
220TRIAE_CS42_4DL_TGACv1_343042_AA1128220.1Golgin subfamily A member5,8
221TRIAE_CS42_1DL_TGACv1_061281_AA0191130.2Plant UBX domain-containing protein 105,6
222TRIAE_CS42_1AL_TGACv1_000217_AA0006430.1Putative protein of unknown function (DUF640)5,4
223TRIAE_CS42_2AL_TGACv1_092997_AA0269140.3Imidazoleglycerol-phosphate dehydratase5,4
224TRIAE_CS42_5BL_TGACv1_404429_AA1299570.1Protein WVD25,2
225TRIAE_CS42_5AL_TGACv1_376738_AA1240450.1F-box domain, cyclin-like domain containing protein5,0
  1. Fold change, 1B-OEX to wild-type ratio. The gene numbers (#) are used in the text