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Table 2 Quantitative trait locus associated with root and mycorrhizal and traits. Markers are focal single nucleotide polymorphisms representing QTL. Bold markers are identified multiple times. Only QTL with significant MQM mapping and KW & stepwise regression values are presented. Values result from MQM Mapping. Position in Mb scaled to the F. vesca genome v2.0. Co-factors are presented for each QTL where appropriate

From: Genetic and phenotypic associations between root architecture, arbuscular mycorrhizal fungi colonisation and low phosphate tolerance in strawberry (Fragaria × ananassa)

Linkage Group

Parent

Trait

Marker Name

LOD

Position (Mb)

Effect size

Co-factor Linkage group

Co-factor Marker Name

Co-factor Position (Mb)

Co-factor LOD

6B

Redgauntlet

Arbuscles

Affx-88,816,268

3.43

4.22

10.0

6C

Affx-88,888,054

35.73

3.16

1C

Hapil

average diameter

Affx-88,869,611

4.71

3.03

11.6

1A

Affx-88,810,176

2.06

3.61

1D

Redgauntlet

average diameter

Affx-88,809,429

3.32

0.34

8.1

1C

Affx-88,812,030

2.87

4.38

2B

Redgauntlet

average diameter

Affx-88,829,957

3.58

29.22

8.8

1C

Affx-88,812,030

2.87

4.38

4A

Redgauntlet

convex area

Affx-88,849,944

4.07

4.68

10.5

7C

Affx-88,901,516

22.44

2.82

2B

Hapil

depth

Affx-88,826,056

3.09

19.97

8.4

5C

Affx-88,860,094

2.79

2.83

1B

Shared

length distribution

Affx-88,817,008

4.68

10.33

11.8

3C

Affx-88,832,542

0.13

3.66

2C

Redgauntlet

medR

Affx-88,825,906

3.44

19.73

5.01

5C

Affx-88,903,845

6.24

3.19

4B

Hapil

medR

Affx-88,856,444

5.01

27.60

12.9

5C

Affx-88,903,845

6.24

3.19

5D

Redgauntlet

medR

Affx-88,867,228

3.42

14.04

9.4

NA

NA

NA

NA

4B

Hapil

perimeter

Affx-88,856,733

3.78

28.04

9.4

6A

Affx-88,875,604

8.17

3.34

5C

Hapil

perimeter

Affx-88,860,878

5.36

5.26

19.2

6B

Affx-88,874,470

2.74

3.13

4B

Hapil

solidity

Affx-88,857,053

5.53

28.68

13.6

6A

Affx-88,875,898

7.54

4.32

5C

Hapil

solidity

Affx-88,903,845

4.42

6.24

12

NA

NA

NA

NA

5D

Redgauntlet

solidity

Affx-88,864,195

3.81

9.83

10.5

NA

NA

NA

NA

6C

Redgauntlet

solidity

Affx-88,887,926

4.01

35.56

9.7

5C

Affx-88,903,845

6.24

4.42

4B

Hapil

specific root length

Affx-88,857,053

4.87

28.68

11.9

5C

Affx-88,903,845

6.24

3.72

6A

Hapil

specific root length

Affx-88,876,002

5.33

7.32

12.8

5C

Affx-88,903,845

6.24

3.72

4B

Hapil

total length

Affx-88,856,733

3.09

28.04

8.6

6A

Affx-88,876,441

6.55

3.46

5C

Hapil

total length

Affx-88,860,878

6.42

5.26

23.8

6A

Affx-88,876,441

6.55

3.46

7B

Hapil

Vesicles

Affx-88,891,845

4.49

14.57

18.8

7C

Affx-88,900,213

20.51

3.22

5C

Hapil

Volume

Affx-88,860,878

6.29

5.26

22.5

6B

Affx-88,874,710

4.81

5.08