TPM threshold | Susceptible genotype | Resistant genotype | ||||
---|---|---|---|---|---|---|
Total contigs | Novel contigs | novel contigs with predicted Pfam domains | Total contigs | Novel contigs | novel contigs with predicted Pfam domains | |
1 | 66,664 | 7915 | 4817 | 54,866 | 11,269 | 6017 |
2 | 53,094 | 4233 | 2520 | 41,481 | 6139 | 3249 |
3 | 46,289 | 3038 | 1757 | 35,620 | 4571 | 2338 |
4 | 41,682 | 2424 | 1370 | 31,810 | 3795 | 1889 |
5 | 38,152 | 2025 | 1131 | 28,950 | 3301 | 1593 |