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Table 2 Up-regulated genes related to Carbon, Nitrogen and Sulfur assimilation

From: Copper-induced concomitant increases in photosynthesis, respiration, and C, N and S assimilation revealed by transcriptomic analyses in Ulva compressa (Chlorophyta)

 

ID Transcript

Proteins

Log2 Fold Change

Calvin-Benson Cycle

CL5634.Contig3_All

Ribulose bisphosphate carboxylase small chain 1

1.2

CL5634.Contig2_All

Ribulose bisphosphate carboxylase small chain 1

8.9

CL12005.Contig2_All

Ribulose bisphosphate carboxylase small chain 1

4.7

CL12005.Contig1_All

Ribulose bisphosphate carboxylase small chain 1

1.4

Unigene16805_All

Ribulose bisphosphate carboxylase small chain 1

2.8

CL5634.Contig4_All

Ribulose bisphosphate carboxylase small chain 1

1.3

CL12005.Contig3_All

Ribulose bisphosphate carboxylase small chain 2

1.8

Unigene12933_All

Ribulose bisphosphate carboxylase large chain

1.6

CL8954.Contig2_All

Phosphoglycerate kinase

2.1

Unigene41371_All

Phosphoglycerate kinase

3.4

CL1769.Contig1_All

Phosphoglycerate kinase

1.0

CL1769.Contig2_All

Phosphoglycerate kinase

1.5

Unigene32099_All

Phosphoglycerate kinase

4.7

Unigene41512_All

Phosphoglycerate kinase

5.1

CL1973.Contig6_All

Glyceraldehyde-3-phosphate dehydrogenase

6.0

CL1973.Contig3_All

Glyceraldehyde-3-phosphate dehydrogenase

1.3

CL8458.Contig1_All

Glyceraldehyde-3-phosphate dehydrogenase

2.5

CL8458.Contig2_All

Glyceraldehyde-3-phosphate dehydrogenase

3.0

CL1973.Contig7_All

Glyceraldehyde-3-phosphate dehydrogenase

1.0

CL12146.Contig6_All

Glyceraldehyde-3-phosphate dehydrogenase

1.6

Unigene26_All

Glyceraldehyde-3-phosphate dehydrogenase

1.5

Unigene32957_All

Fructose-bisphosphate aldolase 1

7.0

Unigene32956_All

Fructose-bisphosphate aldolase 1

2.5

CL2940.Contig6_All

Fructose-bisphosphate aldolase 1

1.3

Unigene13983_All

Fructose-bisphosphate aldolase 5

3.8

CL2275.Contig2_All

Fructose-bisphosphate aldolase 8

1.0

Unigene29154_All

Fructose-1,6-bisphosphatase

1.3

Unigene38319_All

Transketolase

4.3

Unigene29707_All

Transketolase

1.8

CL11843.Contig2_All

Phosphoribulokinase

1.9

Unigene42641_All

Phosphoribulokinase

2.9

Nitrogen Assimilation

Unigene26010_All

Nitrate reductase

2.4

CL10485.Contig1_All

Nitrate reductase

3.0

Unigene32044_All

Glutamine synthetase

5.3

Unigene79885_All

Glutamine synthetase

1.2

Unigene10873_All

Glutamine synthetase

2.3

CL1194.Contig12_All

Argininosuccinate lyase

3.7

CL1194.Contig11_All

Argininosuccinate lyase

9.2

CL1194.Contig13_All

Argininosuccinate lyase

1.3

Unigene25622_All

Fumarate hydratase

4.1

Unigene14757_All

Fumarate hydratase

1.1

Sulfur assimilation

CL1413.Contig2_All

ATP sulfurylase

1.8

CL1413.Contig5_All

ATP sulfurylase

1.2

CL1413.Contig8_All

ATP sulfurylase

1.9

CL1413.Contig9_All

ATP sulfurylase

2.7

Unigene66570_All

ATP sulfurylase

3.1

Unigene1609_All

APS reductase

1.8

CL7094.Contig2_All

APS reductase

3.3

Unigene803_All

APS reductase

1.9

Unigene15137_All

APS reductase

5.4

Unigene17508_All

Sulfite reductase

1.7

CL9121.Contig1_All

Sulfite reductase

2.4

CL9650.Contig2_All

Sulfite reductase

2.8

Unigene823_All

Cysteine synthase

2.1

CL10220.Contig15_All

Cysteine synthase

3.1

CL10220.Contig39_All

Cysteine synthase

2.2

CL10220.Contig51_All

Cysteine synthase

1.9

CL10220.Contig56_All

Cysteine synthase

1.0

Unigene33426_All

Cysteine synthase

3.9

Unigene1587_All

Cysteine synthase

4.6

CL1730.Contig3_All

Glutamate-cysteine ligase

2.1

CL2777.Contig3_All

Glutamate-cysteine ligase

1.8

Unigene6218_All

Glutamate-cysteine ligase

4.2

Unigene6958_All

Glutamate-cysteine ligase

2.6

Unigene5542_All

Glutamate-cysteine ligase

3.6

Unigene25762_All

Glutamate-cysteine ligase

1.2

Unigene80578_All

Glutamate-cysteine ligase

5.4

Unigene28997_All

Glutathione synthetase

3.6

Unigene28998_All

Glutathione synthetase

1.3

Unigene28999_All

Glutathione synthetase

1.8

Unigene42348_All

Glutathione synthetase

1.3