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Table 8 Predicted R genes induced by CEF-082 and V. dahliae

From: Transcriptome analysis reveals the defense mechanism of cotton against Verticillium dahliae in the presence of the biocontrol fungus Chaetomium globosum CEF-082

Transcript ID

Type

log2-Fold Change (12 h)

log2-Fold Change (48 h)

Nr Functional Annotation

Gh_A05G0560

/

0.753709773

1.881639236

DNA-damage-repair/toleration protein DRT100-like [Gossypium raimondii]

Gh_A05G1020

/

1.557304461

1.177105999

CBL-interacting serine/threonine-protein kinase 25-like [Gossypium hirsutum]

Gh_A05G3196

/

1.49233142

3.400801654

cyclic nucleotide-gated ion channel 2-like [Gossypium arboreum]

Gh_A05G3470

/

−1.679248485

3.0042548

NADPH:quinone oxidoreductase-like [Gossypium arboreum]

Gh_A06G1701

/

1.11748676

1.125924709

shikimate O-hydroxycinnamoyltransferase-like [Gossypium arboreum]

Gh_A09G1415

/

2.763055805

1.138512634

peroxidase 21-like [Gossypium hirsutum]

Gh_A11G0631

/

−1.427211837

1.313850285

probable calcium-binding protein CML45 [Gossypium hirsutum]

Gh_A11G1367

/

−2.131571879

−1.430486114

uncharacterized protein LOC105803388 [Gossypium raimondii]

Gh_A11G3297

/

4.769980778

−6.621901362

uncharacterized protein LOC107935227 [Gossypium hirsutum]

Gh_D02G0258

/

−2.480311701

−1.300029512

receptor-like protein 12 [Gossypium hirsutum]

Gh_D04G0409

/

8.681445478

5.183990265

cyclic nucleotide-gated ion channel 2-like [Gossypium hirsutum]

Gh_D05G0689

/

0.530244279

2.104072295

DNA-damage-repair/toleration protein DRT100 [Theobroma cacao]

Gh_D07G1197

/

2.197263059

1.546938795

flavonoid 3′,5′-hydroxylase 2-like [Gossypium hirsutum]

Gh_D08G1512

/

1.61343892

2.05940005

hypothetical protein B456_002G144600 [Gossypium raimondii]

Gh_D09G0858

/

−1.30017514

−1.614570284

hypothetical protein B456_006G104900, partial [Gossypium raimondii]

Gh_D10G1431

/

1.879317791

1.074465933

chalcone synthase [Kandelia candel]

Gh_D11G0741

/

−1.323988617

1.425564743

probable calcium-binding protein CML45 [Gossypium hirsutum]

Gh_D11G1512

/

−1.351190116

−1.111728188

uncharacterized protein LOC105803388 [Gossypium raimondii]

Gh_D11G3107

/

3.221799962

−4.647807823

uncharacterized protein LOC107925949 [Gossypium hirsutum]