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Table 8 Predicted R genes induced by CEF-082 and V. dahliae

From: Transcriptome analysis reveals the defense mechanism of cotton against Verticillium dahliae in the presence of the biocontrol fungus Chaetomium globosum CEF-082

Transcript IDTypelog2-Fold Change (12 h)log2-Fold Change (48 h)Nr Functional Annotation
Gh_A05G0560/0.7537097731.881639236DNA-damage-repair/toleration protein DRT100-like [Gossypium raimondii]
Gh_A05G1020/1.5573044611.177105999CBL-interacting serine/threonine-protein kinase 25-like [Gossypium hirsutum]
Gh_A05G3196/1.492331423.400801654cyclic nucleotide-gated ion channel 2-like [Gossypium arboreum]
Gh_A05G3470/−1.6792484853.0042548NADPH:quinone oxidoreductase-like [Gossypium arboreum]
Gh_A06G1701/1.117486761.125924709shikimate O-hydroxycinnamoyltransferase-like [Gossypium arboreum]
Gh_A09G1415/2.7630558051.138512634peroxidase 21-like [Gossypium hirsutum]
Gh_A11G0631/−1.4272118371.313850285probable calcium-binding protein CML45 [Gossypium hirsutum]
Gh_A11G1367/−2.131571879−1.430486114uncharacterized protein LOC105803388 [Gossypium raimondii]
Gh_A11G3297/4.769980778−6.621901362uncharacterized protein LOC107935227 [Gossypium hirsutum]
Gh_D02G0258/−2.480311701−1.300029512receptor-like protein 12 [Gossypium hirsutum]
Gh_D04G0409/8.6814454785.183990265cyclic nucleotide-gated ion channel 2-like [Gossypium hirsutum]
Gh_D05G0689/0.5302442792.104072295DNA-damage-repair/toleration protein DRT100 [Theobroma cacao]
Gh_D07G1197/2.1972630591.546938795flavonoid 3′,5′-hydroxylase 2-like [Gossypium hirsutum]
Gh_D08G1512/1.613438922.05940005hypothetical protein B456_002G144600 [Gossypium raimondii]
Gh_D09G0858/−1.30017514−1.614570284hypothetical protein B456_006G104900, partial [Gossypium raimondii]
Gh_D10G1431/1.8793177911.074465933chalcone synthase [Kandelia candel]
Gh_D11G0741/−1.3239886171.425564743probable calcium-binding protein CML45 [Gossypium hirsutum]
Gh_D11G1512/−1.351190116−1.111728188uncharacterized protein LOC105803388 [Gossypium raimondii]
Gh_D11G3107/3.221799962−4.647807823uncharacterized protein LOC107925949 [Gossypium hirsutum]