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Table 7 Predicted R genes induced by CEF-082 and V. dahliae

From: Transcriptome analysis reveals the defense mechanism of cotton against Verticillium dahliae in the presence of the biocontrol fungus Chaetomium globosum CEF-082

Transcript ID

Type

log2-Fold Change (12 h)

log2-Fold Change (48 h)

Nr Functional Annotation

Gh_D05G3613

RLP

−3.636894741

−1.070068403

flavonol sulfotransferase-like [Gossypium hirsutum]

Gh_D05G3615

RLP

3.336220891

2.121111678

hypothetical protein B456_009G443300 [Gossypium raimondii]

Gh_D05G3699

RLP

3.056269729

4.673541612

kinesin KP1-like [Gossypium raimondii]

Gh_D08G1871

RLP

1.08210341

1.06909527

probable LRR receptor-like serine/threonine-protein kinase At1g34110 [Gossypium hirsutum]

Gh_A10G2072

TNL

1.586976576

1.014417675

TMV resistance protein N-like [Gossypium hirsutum]

Gh_A11G2091

TNL

1.199688858

1.260578514

transcription repressor MYB5-like [Gossypium arboreum]

Gh_D01G0539

TNL

−3.861003635

1.878860421

MYB-related protein 330 [Gossypium hirsutum]

Gh_D01G1550

TNL

1.22796154

1.351072869

lipase [Corchorus capsularis]

Gh_D07G2090

TNL

−1.58798514

−1.255994867

MYB transcription factor MYB30 [Gossypium hirsutum]

Gh_D08G0256

TNL

−3.281882012

1.421995876

transcription repressor MYB6-like [Gossypium hirsutum]

Gh_D09G1659

TNL

2.803942312

1.245838921

MYB-related protein 308-like [Gossypium hirsutum]

Gh_D10G2351

TNL

6.829614248

1.155493756

TMV resistance protein N-like isoform X2 [Gossypium hirsutum]

Gh_D11G0336

TNL

1.925007761

1.072893447

MYB-related protein 306 [Gossypium hirsutum]

Gh_A06G1144

T

1.922712186

1.745773435

ethylene-responsive transcription factor 4-like [Gossypium hirsutum]

Gh_A12G1620

T

−1.404115121

1.637338509

NAC domain-containing protein 100-like [Gossypium hirsutum]

Gh_D01G0514

T

1.231975072

1.260531662

NAC domain-containing protein 72-like [Gossypium hirsutum]

Gh_D06G1403

T

1.291258193

1.247681127

ethylene-responsive transcription factor 4-like [Gossypium hirsutum]

Gh_D10G1537

T

2.276313579

4.332088904

ethylene-responsive transcription factor 1B-like [Gossypium raimondii]

Gh_D12G2494

T

−1.419500468

1.382825786

putative dehydration responsive element binding protein [Gossypium hirsutum]

Gh_A03G2044

Other

1.343265394

−1.171383404

thaumatin-like protein [Gossypium arboreum]

Gh_D11G2998

Other

2.626616578

−1.757148487

thaumatin-like protein isoform X1 [Gossypium hirsutum]

Gh_A02G0236

/

2.076793222

1.040351538

chalcone synthase [Vaccinium ashei]

Gh_A04G0830

/

10.27309684

7.911807354

glutathione S-transferase U16-like [Gossypium hirsutum]