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Table 6 Predicted R genes induced by CEF-082 and V. dahliae

From: Transcriptome analysis reveals the defense mechanism of cotton against Verticillium dahliae in the presence of the biocontrol fungus Chaetomium globosum CEF-082

Transcript ID

Type

log2-Fold Change (12 h)

log2-Fold Change (48 h)

Nr Functional Annotation

Gh_A01G0315

CNL

1.037589939

1.4113336

disease resistance protein At4g27190-like, partial [Gossypium hirsutum]

Gh_A08G1253

CNL

−6.740709401

5.746950454

kelch repeat type 1 [Corchorus capsularis]

Gh_D02G0329

CNL

−5.561290274

4.673143293

probable glutathione S-transferase [Gossypium hirsutum]

Gh_D07G2361

CNL

1.502212669

−4.237409783

hypothetical protein B456_001G187600 [Gossypium raimondii]

Gh_D11G2274

CNL

−1.125013164

− 1.176243053

AAA-ATPase At1g43910-like [Gossypium hirsutum]

Gh_A04G0855

CN

5.289214165

4.734256842

uncharacterized protein LOC108457923 isoform X2 [Gossypium arboreum]

Gh_D09G1718

CN

1.293119787

1.144955552

uncharacterized protein LOC105800125 [Gossypium raimondii]

Gh_Sca089655G01

CN

−1.657997189

−1.535872284

uncharacterized protein LOC107949870 [Gossypium hirsutum]

Gh_A06G1937

Mlo-like

1.358973461

1.345179474

MLO-like protein 2 [Gossypium hirsutum]

Gh_A01G2142

NL

−1.561586712

−1.020990318

NAC domain-containing protein 90-like [Gossypium arboreum]

Gh_A09G1261

NL

2.484985295

2.969406864

E3 ubiquitin-protein ligase PUB23-like [Gossypium hirsutum]

Gh_A09G1326

NL

−1.010963189

1.6799656

B3 domain-containing protein At2g36080-like [Gossypium arboreum]

Gh_D08G1656

NL

−5.969729954

−5.677096641

MOB kinase activator-like 1A isoform X1 [Gossypium hirsutum]

Gh_D11G3107

NL

3.221799962

−4.647807823

uncharacterized protein LOC107925949 [Gossypium hirsutum]

Gh_A01G0470

N

8.54387182

10.19853857

putative RING-H2 finger protein ATL19 [Gossypium hirsutum]

Gh_A03G1126

N

1.517931636

1.090903245

putative ABC transporter C family member 15 [Theobroma cacao]

Gh_A07G1963

N

1.113205106

1.574240958

ABC transporter B family member 19-like isoform X1 [Gossypium hirsutum]

Gh_D09G0181

N

−1.254590611

1.59727426

ABC transporter B family member 19 [Gossypium arboreum]

Gh_D09G1048

N

−1.254965579

1.436429867

ABC transporter G family member 23-like [Gossypium hirsutum]

Gh_D11G0790

N

6.846798953

7.786264797

putative casein kinase II subunit beta-4 [Gossypium hirsutum]

Gh_D11G3289

N

−3.221611506

1.159392828

ABC transporter G family member 20-like [Gossypium hirsutum]

Gh_A01G0355

RLP

1.257686713

1.389731263

LRR receptor-like serine/threonine-protein kinase GSO1 [Gossypium arboreum]

Gh_D01G0066

RLP

2.472710792

−1.905542187

hypothetical protein B456_002G007800 [Gossypium raimondii]

Gh_D01G0386

RLP

1.338494948

1.470239195

probable LRR receptor-like serine/threonine-protein kinase At3g47570 isoform X1 [Gossypium hirsutum]