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Table 6 Predicted R genes induced by CEF-082 and V. dahliae

From: Transcriptome analysis reveals the defense mechanism of cotton against Verticillium dahliae in the presence of the biocontrol fungus Chaetomium globosum CEF-082

Transcript ID Type log2-Fold Change (12 h) log2-Fold Change (48 h) Nr Functional Annotation
Gh_A01G0315 CNL 1.037589939 1.4113336 disease resistance protein At4g27190-like, partial [Gossypium hirsutum]
Gh_A08G1253 CNL −6.740709401 5.746950454 kelch repeat type 1 [Corchorus capsularis]
Gh_D02G0329 CNL −5.561290274 4.673143293 probable glutathione S-transferase [Gossypium hirsutum]
Gh_D07G2361 CNL 1.502212669 −4.237409783 hypothetical protein B456_001G187600 [Gossypium raimondii]
Gh_D11G2274 CNL −1.125013164 − 1.176243053 AAA-ATPase At1g43910-like [Gossypium hirsutum]
Gh_A04G0855 CN 5.289214165 4.734256842 uncharacterized protein LOC108457923 isoform X2 [Gossypium arboreum]
Gh_D09G1718 CN 1.293119787 1.144955552 uncharacterized protein LOC105800125 [Gossypium raimondii]
Gh_Sca089655G01 CN −1.657997189 −1.535872284 uncharacterized protein LOC107949870 [Gossypium hirsutum]
Gh_A06G1937 Mlo-like 1.358973461 1.345179474 MLO-like protein 2 [Gossypium hirsutum]
Gh_A01G2142 NL −1.561586712 −1.020990318 NAC domain-containing protein 90-like [Gossypium arboreum]
Gh_A09G1261 NL 2.484985295 2.969406864 E3 ubiquitin-protein ligase PUB23-like [Gossypium hirsutum]
Gh_A09G1326 NL −1.010963189 1.6799656 B3 domain-containing protein At2g36080-like [Gossypium arboreum]
Gh_D08G1656 NL −5.969729954 −5.677096641 MOB kinase activator-like 1A isoform X1 [Gossypium hirsutum]
Gh_D11G3107 NL 3.221799962 −4.647807823 uncharacterized protein LOC107925949 [Gossypium hirsutum]
Gh_A01G0470 N 8.54387182 10.19853857 putative RING-H2 finger protein ATL19 [Gossypium hirsutum]
Gh_A03G1126 N 1.517931636 1.090903245 putative ABC transporter C family member 15 [Theobroma cacao]
Gh_A07G1963 N 1.113205106 1.574240958 ABC transporter B family member 19-like isoform X1 [Gossypium hirsutum]
Gh_D09G0181 N −1.254590611 1.59727426 ABC transporter B family member 19 [Gossypium arboreum]
Gh_D09G1048 N −1.254965579 1.436429867 ABC transporter G family member 23-like [Gossypium hirsutum]
Gh_D11G0790 N 6.846798953 7.786264797 putative casein kinase II subunit beta-4 [Gossypium hirsutum]
Gh_D11G3289 N −3.221611506 1.159392828 ABC transporter G family member 20-like [Gossypium hirsutum]
Gh_A01G0355 RLP 1.257686713 1.389731263 LRR receptor-like serine/threonine-protein kinase GSO1 [Gossypium arboreum]
Gh_D01G0066 RLP 2.472710792 −1.905542187 hypothetical protein B456_002G007800 [Gossypium raimondii]
Gh_D01G0386 RLP 1.338494948 1.470239195 probable LRR receptor-like serine/threonine-protein kinase At3g47570 isoform X1 [Gossypium hirsutum]