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Table 6 Predicted R genes induced by CEF-082 and V. dahliae

From: Transcriptome analysis reveals the defense mechanism of cotton against Verticillium dahliae in the presence of the biocontrol fungus Chaetomium globosum CEF-082

Transcript IDTypelog2-Fold Change (12 h)log2-Fold Change (48 h)Nr Functional Annotation
Gh_A01G0315CNL1.0375899391.4113336disease resistance protein At4g27190-like, partial [Gossypium hirsutum]
Gh_A08G1253CNL−6.7407094015.746950454kelch repeat type 1 [Corchorus capsularis]
Gh_D02G0329CNL−5.5612902744.673143293probable glutathione S-transferase [Gossypium hirsutum]
Gh_D07G2361CNL1.502212669−4.237409783hypothetical protein B456_001G187600 [Gossypium raimondii]
Gh_D11G2274CNL−1.125013164− 1.176243053AAA-ATPase At1g43910-like [Gossypium hirsutum]
Gh_A04G0855CN5.2892141654.734256842uncharacterized protein LOC108457923 isoform X2 [Gossypium arboreum]
Gh_D09G1718CN1.2931197871.144955552uncharacterized protein LOC105800125 [Gossypium raimondii]
Gh_Sca089655G01CN−1.657997189−1.535872284uncharacterized protein LOC107949870 [Gossypium hirsutum]
Gh_A06G1937Mlo-like1.3589734611.345179474MLO-like protein 2 [Gossypium hirsutum]
Gh_A01G2142NL−1.561586712−1.020990318NAC domain-containing protein 90-like [Gossypium arboreum]
Gh_A09G1261NL2.4849852952.969406864E3 ubiquitin-protein ligase PUB23-like [Gossypium hirsutum]
Gh_A09G1326NL−1.0109631891.6799656B3 domain-containing protein At2g36080-like [Gossypium arboreum]
Gh_D08G1656NL−5.969729954−5.677096641MOB kinase activator-like 1A isoform X1 [Gossypium hirsutum]
Gh_D11G3107NL3.221799962−4.647807823uncharacterized protein LOC107925949 [Gossypium hirsutum]
Gh_A01G0470N8.5438718210.19853857putative RING-H2 finger protein ATL19 [Gossypium hirsutum]
Gh_A03G1126N1.5179316361.090903245putative ABC transporter C family member 15 [Theobroma cacao]
Gh_A07G1963N1.1132051061.574240958ABC transporter B family member 19-like isoform X1 [Gossypium hirsutum]
Gh_D09G0181N−1.2545906111.59727426ABC transporter B family member 19 [Gossypium arboreum]
Gh_D09G1048N−1.2549655791.436429867ABC transporter G family member 23-like [Gossypium hirsutum]
Gh_D11G0790N6.8467989537.786264797putative casein kinase II subunit beta-4 [Gossypium hirsutum]
Gh_D11G3289N−3.2216115061.159392828ABC transporter G family member 20-like [Gossypium hirsutum]
Gh_A01G0355RLP1.2576867131.389731263LRR receptor-like serine/threonine-protein kinase GSO1 [Gossypium arboreum]
Gh_D01G0066RLP2.472710792−1.905542187hypothetical protein B456_002G007800 [Gossypium raimondii]
Gh_D01G0386RLP1.3384949481.470239195probable LRR receptor-like serine/threonine-protein kinase At3g47570 isoform X1 [Gossypium hirsutum]