Table 1 Enrichment analysis of metabolic pathways significantly over-represented in the three wheat genotypes
Gene expression pattern | Cluster number | Pathway Description | P value |
|---|---|---|---|
High in Zavitan | 1 | acyl-CoA thioesterase pathway | 1.05E-02 |
sucrose degradation | 1.29E-02 | ||
starch degradation | 1.87E-02 | ||
β-D-glucuronide degradation | 4.19E-02 | ||
2 | superpathway of polyamine biosynthesis | 2.06E-02 | |
β-alanine betaine biosynthesis | 3.56E-02 | ||
Low in Zavitan | 3 | threonine biosynthesis from homoserine | 2.44E-02 |
flavonoid biosynthesis | 2.73E-02 | ||
phenylpropanoid biosynthesis | 3.37E-02 | ||
de novo biosynthesis of pyrimidine deoxyribonucleotides | 4.06E-02 | ||
4 | cellulose biosynthesis | 2.70E-03 | |
trehalose degradation (high osmolarity) | 1.47E-02 | ||
phospholipases | 1.76E-02 | ||
ascorbate biosynthesis | 2.24E-02 | ||
Slightly low in Svevo | 5 | isopentenyl diphosphate biosynthesis | 3.52E-04 |
glycine cleavage complex | 7.60E-03 | ||
divinyl ether biosynthesis II (13-LOX) | 1.41E-02 | ||
13-LOX and 13-HPL pathway | 1.41E-02 | ||
brassinosteroid biosynthesis | 2.62E-02 | ||
glycerol degradation | 3.45E-02 | ||
reductive TCA cycle | 4.88E-02 | ||
6 | brassinosteroid biosynthesis | 1.29E-03 | |
UDP-N-acetylgalactosamine biosynthesis | 3.91E-03 | ||
UDP-glucose conversion | 4.78E-03 | ||
Calvin cycle | 4.78E-03 | ||
GDP-L-fucose biosynthesis I (from GDP-D-mannose) | 5.53E-03 | ||
NAD salvage pathway II | 9.16E-03 | ||
UDP-galactose biosynthesis | 1.10E-02 | ||
ent-kaurene biosynthesis | 1.17E-02 | ||
dTDP-L-rhamnose biosynthesis | 1.95E-02 | ||
superpathway of GA12 biosynthesis | 2.10E-02 | ||
galactose degradation | 2.22E-02 | ||
γ-glutamyl cycle | 2.55E-02 | ||
GDP-D-rhamnose biosynthesis | 4.59E-02 | ||
Slightly low in Zavitan | 7 | glutathione biosynthesis | 1.91E-04 |
β-alanine biosynthesis | 3.66E-03 | ||
gluconeogenesis | 5.68E-03 | ||
tyrosine degradation | 5.82E-03 | ||
phospholipid desaturation | 1.87E-02 | ||
fatty acid β-oxidation | 3.98E-02 | ||
glycolipid biosynthesis | 4.11E-02 | ||
methionine biosynthesis | 4.11E-02 | ||
homocysteine and cysteine biosynthesis | 4.77E-02 | ||
Slightly low in Chinese Spring | 8 | cytokinins biosynthesis | 1.48E-03 |