Table 1 Significantly differentially expressed miRNA families and miRNAs (P < 0.05) in tissues of root and shoot of Brassica napus seedlings under Cd stress
Name | Root | Shoot | ||||||
|---|---|---|---|---|---|---|---|---|
miRNA num. | Up | Down | Mean [log2(Ratio)] | miRNA num. | Up | Down | Mean [log2(Ratio)] | |
MIR395 family | 2 | 2 | 0 | 2.51 | 2 | 2 | 0 | 2.38 |
MIR397 family | 1 | 1 | 0 | 2.85 | 1 | 1 | 0 | 3.84 |
MIR398 family | 2 | 2 | 0 | 2.68 | 2 | 2 | 0 | 1.07 |
MIR408 family | 1 | 1 | 0 | 3.76 | 1 | 1 | 0 | 2.03 |
MIR858 family | 1 | 0 | 1 | 1.3 | 1 | 1 | 0 | 1.8 |
novel_miR_121 | 1 | 1 | 0 | 0.61 | 1 | 0 | 1 | 0.7 |
novel_miR_164 | 1 | 1 | 0 | 3.29 | 1 | 1 | 0 | 3.52 |
novel_miR_178 | 1 | 1 | 0 | 3.37 | 1 | 1 | 0 | 2.3 |
MIR158 family | 1 | 0 | 1 | 0.85 | – | – | – | – |
MIR169_2 family | 1 | 0 | 1 | 1.92 | – | – | – | – |
MIR827_2 family | 1 | 0 | 1 | 0.96 | – | – | – | – |
MIR845_1 family | 1 | 1 | 0 | 0.66 | – | – | – | – |
MIR860 family | 1 | 0 | 1 | 1.45 | – | – | – | – |
MIR1511 family | 1 | 0 | 1 | 1.21 | – | – | – | – |
novel_miR_160 | 1 | 0 | 1 | 2.35 | – | – | – | – |
novel_miR_19 | 1 | 0 | 1 | 1.07 | – | – | – | – |
novel_miR_4 | 1 | 0 | 1 | 1.02 | – | – | – | – |
novel_miR_71 | 1 | 0 | 1 | 1.49 | – | – | – | – |
novel_miR_78 | 1 | 1 | 0 | 3.86 | – | – | – | – |
novel_miR_83 | 1 | 0 | 1 | 1.97 | – | – | – | – |
MIR166 family | – | – | – | – | 2 | 2 | 0 | 1.07 |
MIR172 family | – | – | – | – | 3 | 0 | 3 | 0.77 |
MIR319 family | – | – | – | – | 2 | 1 | 1 | 1.11 |
MIR390 family | – | – | – | – | 1 | 1 | 0 | 1.07 |
MIR391 family | – | – | – | – | 1 | 0 | 1 | 0.72 |
MIR396 family | – | – | – | – | 1 | 0 | 1 | 0.92 |
MIR399 family | – | – | – | – | 1 | 1 | 0 | 0.63 |
MIR1140 family | – | – | – | – | 1 | 1 | 0 | 0.59 |
MIR2111 family | – | – | – | – | 1 | 1 | 0 | 2.1 |
bna-miR6029 | – | – | – | – | 1 | 0 | 1 | 0.69 |
bna-miR6034 | – | – | – | – | 1 | 1 | 0 | 1.15 |
novel_miR_103 | – | – | – | – | 1 | 0 | 1 | 0.77 |
novel_miR_159 | – | – | – | – | 1 | 0 | 1 | 0.6 |
novel_miR_167 | – | – | – | – | 1 | 0 | 1 | 0.74 |
novel_miR_38 | – | – | – | – | 1 | 1 | 0 | 2.01 |
Total | 22 | 11 | 11 | – | 29 | 18 | 11 | – |