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Table 1 Genes annotated for developmental processes, reproduction and/or embryo development between female, male and hermaphrodite flower buds (size 1 to 6 mm)

From: Differential gene expression among three sex types reveals a MALE STERILITY 1 (CpMS1) for sex differentiation in papaya

Gene IDDescriptionLogCPMMale vs. FemaleMale vs. HermaphroditeHermaphrodite vs. Female
FC*FDR*FC*FDR*FC*FDR*
evm.model.supercontig_2.119PHD Finger MALE STERILITY 15.872835.032.99E-02294.201.01E-019.649.69E-01
evm.model.supercontig_157.32Glucan endo-1,3-beta-glucosidase-like5.2030.134.50E-0219.581.69E-011.549.79E-01
evm.model.supercontig_87.13PHD Finger MALE MEIOCYTE DEATH 10.1121.622.82E-021.321.00E+ 0016.446.83E-02
evm.model.supercontig_85.48Probable kinase1.809.141.72E-021.921.00E+ 004.771.68E-01
evm.model.supercontig_50.85Glycerol-3-phosphate acyltransferase 15.706.164.05E-024.312.07E-011.438.91E-01
evm.model.supercontig_1525.1Abscisic acid 8-hydroxylase 15.225.321.34E-043.722.57E-031.433.48E-01
evm.model.supercontig_6.104Steroid 22-alpha-hydroxylase/ cytochrome P450 90B1-like3.974.732.98E-041.241.00E+ 003.813.18E-03
evm.model.supercontig_75.17E3 ubiquitin-protein ligase XBAT32/334.143.491.02E-032.231.49E-011.565.40E-01
evm.model.supercontig_26.241Cytochrome P450 83B1 (CYP83B1)4.922.542.93E-021.121.00E+ 002.266.18E-02
evm.model.supercontig_427.3Protein of unknown function (DUF642)6.772.401.64E-04−1.413.79E-013.382.66E-05
evm.model.supercontig_27.166G-type lectin S-receptor-like serine threonine-kinase RKS14.482.094.30E-021.724.07E-011.218.95E-01
evm.model.supercontig_6.12Pentatricopeptide repeat-containing protein chloroplastic5.382.023.09E-031.571.58E-011.295.27E-01
evm.model.supercontig_26.316Floral homeotic protein PISTILLATA6.991.834.97E-03−1.171.00E+ 002.141.44E-03
evm.model.supercontig_16.181Condensin-2 complex subunit D3 (NCAPD3)4.541.445.41E-01−1.763.23E-012.535.09E-03
evm.model.supercontig_44.60Transcription factor MYB4-like1.681.169.91E-018.436.06E-02−7.254.32E-02
evm.model.supercontig_59.35Ammonium transporter 1 member 27.05−1.421.95E-011.453.10E-01−2.067.87E-04
evm.model.supercontig_13.86Tetraspanin-11 related2.43−1.956.84E-01−7.741.92E-023.961.02E-01
evm.model.supercontig_12.194Scarecrow-like transcription factor PAT17.00−2.092.49E-04−1.628.51E-02−1.294.66E-01
evm.model.supercontig_70.45Potassium transporter 47.87−2.102.55E-03−1.211.00E+ 00−1.731.72E-02
evm.model.supercontig_33.178Calmodulin9.88−2.127.14E-04−1.975.38E-03−1.079.75E-01
evm.model.supercontig_8.181Sterol 3-beta-glucosyltransferase UGT80A27.17−2.146.60E-04−1.502.37E-01−1.431.93E-01
evm.model.supercontig_18.43bZIP transcription factor 536.73−2.151.32E-04−1.541.42E-01−1.402.19E-01
evm.model.supercontig_27.172G-type lectin S-receptor-like serine threonine- kinase B1204.56−2.201.84E-02−1.211.00E+ 00− 1.821.27E-01
evm.model.supercontig_52.111VAN3-binding/Auxin canalisation (Auxin canalis)5.61−2.225.19E-04−1.646.37E-02−1.352.98E-01
evm.model.supercontig_132.29E3 ubiquitin- ligase COP1-like/ Protein suppressor of PHYA-105 14.30−2.223.88E-021.091.00E+ 00−2.432.14E-02
evm.model.supercontig_6.349Thioredoxin reductase 2-like5.96−2.508.72E-05−1.673.59E-02−1.507.78E-02
evm.model.supercontig_18.81Transcription factor UPBEAT12.86−3.241.12E-01−5.372.85E-021.667.36E-01
evm.model.supercontig_25.116AP2-like ethylene-responsive transcription factor AIL12.96−3.714.92E-02−1.191.00E+ 00− 3.111.24E-01
evm.model.supercontig_160.4Receptor kinase HAIKU29.55−3.719.38E-04−1.951.01E-01−1.905.32E-02
evm.model.supercontig_49.19Abscisic acid 8 -hydroxylase 43.51−4.535.74E-03−6.177.33E-031.368.60E-01
evm.model.supercontig_444.5Beta-glucosidase 27-like1.15−10.022.50E-02−5.433.00E-01−1.858.20E-01
evm.model.supercontig_189.36Beta-glucosidase 32-like2.34−17.197.54E-03−3.893.65E-01−4.421.15E-01
evm.model.supercontig_1.155Cytochrome P450 85A-like/ Brassinosteroid-6-oxidase 2 (CYP85A2, BR6OX2)−0.77−60.773.13E-02−8.797.56E-01−6.912.89E-01
  1. aDifferentially expressed genes parameters: Fold-Change (FC) > 2 or < − 2 and a False Discovery Rate (FDR) < 0.05