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Table 6 QTL analysis for four seed related traits

From: QTL identification for seed weight and size based on a high-density SLAF-seq genetic map in peanut (Arachis hypogaea L.)

Trait

Enva

QTL

LGb

CIc

Flanking Markers

Physical position (Mb)

LODd

ADD e

PVE f (%)

100SW

2017LX

q100SW16a

16

9.8–10.7

Marker9375–Marker9395

8.84–11.61

3.34

−11.43

29.81

2017SY

q100SW2

2

0–0.5

Marker938–Marker893

92.75–99.81

6.27

−14.87

24.69

2018DY

q100SW16b

16

13.6–14.1

Marker9444–Marker9463

15.96–18.31

7.60

−11.83

35.39

2018LX

q100SW16c

16

9.9–10.7

Marker9372–Marker9395

8.49–11.61

5.96

−13.70

30.47

SL

2017LX

qSL2a

2

0–0.7

Marker938–Marker893

92.75–99.81

17.62

−1.96

61.74

2017LX

qSL7

7

0.6–2.6

Marker4618–Marker4664

74.27–76.91

3.16

0.21

0.74

2017SY

qSL2b

2

0–0.8

Marker938–Marker893

92.75–99.81

15.88

−2.08

42.43

2017SY

qSL9a

9

50.3–53.2

Marker5024–Marker5026

19.18–19.29

3.55

0.64

4.05

2018DY

qSL2c

2

0–0.8

Marker938–Marker893

92.75–99.81

8.38

−1.80

51.20

2018DY

qSL5.1

5

21.6–22.1

Marker3540–Marker3535

93.27–94.03

3.21

−1.60

40.25

2018DY

qSL5.2

5

26.7–30.8

Marker3455–Marker3523

85.42–91.99

3.41

−1.53

36.91

2018DY

qSL10

10

57.4–73.3

Marker5972–Marker6000

108.15–115.70

3.61

−1.32

27.48

2018LX

qSL2d

2

0–0.7

Marker938–Marker893

92.75–99.81

20.19

−2.13

53.60

2018LX

qSL9b

9

55.2–56.2

Marker5044–Marker5514

22.03–90.20

3.75

0.95

9.62

SW

2017LX

qSW13

13

60.3–64.7

Marker7532–Marker7533

138.32–138.50

3.45

−0.32

12.12

2017 LX

qSW16.1a

16

7.7–14.8

Marker9360–Marker9483

7.33–19.54

4.17

−0.35

13.68

2017LX

qSW16.2a

16

16.1–18.6

Marker9525–Marker9662

25.49–53.24

3.62

−0.33

12.64

2018DY

qSW5

5

38.5–40.0

Marker3468–Marker3409

77.32–86.33

3.92

−0.40

15.07

2018DY

qSW16b

16

14.8–15.8

Marker9464–Marker9503

18.81–22.71

4.47

−0.48

21.58

L/W

2017LX

qLW2a

2

0–0.7

Marker938–Marker893

92.75–99.81

27.47

−0.21

83.23

2017LX

qLW5a

5

12.9–14.0

Marker3612–Marker3590

102.71–106.10

4.18

−0.15

43.66

2017SY

qLW2b

2

0–0.6

Marker938–Marker893

92.75–99.81

15.41

−0.19

65.77

2017SY

qLW5b

5

11.7–12.9

Marker3622–Marker3604

105.45–107.08

4.3

−0.15

45.83

2018DY

qLW2c

2

0–0.7

Marker938–Marker893

92.75–99.81

24.52

−0.15

69.07

2018DY

qLW3

3

41.5–45.8

Marker1886–Marker1906

140.53–143.23

4.9

0.04

4.85

2018LX

qLW2d

2

0–0.7

Marker938–Marker893

92.75–99.81

31.55

−0.21

70.64

2018LX

qLW9

9

55.3–56.0

Marker5041–Marker5511

21.40–89.29

4.39

0.09

4.47

  1. a Env environment;
  2. b LG linkage group;
  3. c CI confidence interval;
  4. d LOD logarithm of the odds;
  5. e ADD additive effect;
  6. f PVE phenotypic variation explained