TY - JOUR AU - Wu, J. AU - Baldwin, I. T. PY - 2009 DA - 2009// TI - Herbivory-induced signalling in plants: perception and action JO - Plant Cell Environ VL - 32 UR - https://doi.org/10.1111/j.1365-3040.2009.01943.x DO - 10.1111/j.1365-3040.2009.01943.x ID - Wu2009 ER - TY - JOUR AU - Howe, G. A. AU - Jander, G. PY - 2008 DA - 2008// TI - Plant immunity to insect herbivores JO - Annu Rev Plant Biol VL - 59 UR - https://doi.org/10.1146/annurev.arplant.59.032607.092825 DO - 10.1146/annurev.arplant.59.032607.092825 ID - Howe2008 ER - TY - JOUR AU - Bonaventure, G. AU - Vandoorn, A. AU - Baldwin, I. T. PY - 2011 DA - 2011// TI - Herbivore-associated elicitors: FAC signaling and metabolism JO - Trends Plant Sci VL - 16 UR - https://doi.org/10.1016/j.tplants.2011.01.006 DO - 10.1016/j.tplants.2011.01.006 ID - Bonaventure2011 ER - TY - JOUR AU - Will, T. AU - Furch, A. C. AU - Zimmermann, M. R. PY - 2013 DA - 2013// TI - How phloem-feeding insects face the challenge of phloem-located defenses JO - Front Plant Sci VL - 4 UR - https://doi.org/10.3389/fpls.2013.00336 DO - 10.3389/fpls.2013.00336 ID - Will2013 ER - TY - JOUR AU - Wu, J. AU - Baldwin, I. T. PY - 2010 DA - 2010// TI - New insights into plant responses to the attack from insect herbivores JO - Annu Rev Genet VL - 44 UR - https://doi.org/10.1146/annurev-genet-102209-163500 DO - 10.1146/annurev-genet-102209-163500 ID - Wu2010 ER - TY - JOUR AU - Zebelo, S. A. AU - Maffei, M. E. PY - 2015 DA - 2015// TI - Role of early signalling events in plant-insect interactions JO - J Exp Bot VL - 66 UR - https://doi.org/10.1093/jxb/eru480 DO - 10.1093/jxb/eru480 ID - Zebelo2015 ER - TY - JOUR AU - Paschold, A. AU - Halitschke, R. AU - Baldwin, I. T. PY - 2007 DA - 2007// TI - Co(i)-ordinating defenses: NaCOI1 mediates herbivore- induced resistance in Nicotiana attenuata and reveals the role of herbivore movement in avoiding defenses JO - Plant J VL - 51 UR - https://doi.org/10.1111/j.1365-313X.2007.03119.x DO - 10.1111/j.1365-313X.2007.03119.x ID - Paschold2007 ER - TY - JOUR AU - Schweizer, F. AU - Fernandez-Calvo, P. AU - Zander, M. AU - Diez-Diaz, M. AU - Fonseca, S. AU - Glauser, G. AU - Lewsey, M. G. AU - Ecker, J. R. AU - Solano, R. AU - Reymond, P. PY - 2013 DA - 2013// TI - Arabidopsis basic helix-loop-helix transcription factors MYC2, MYC3, and MYC4 regulate glucosinolate biosynthesis, insect performance, and feeding behavior JO - Plant Cell VL - 25 UR - https://doi.org/10.1105/tpc.113.115139 DO - 10.1105/tpc.113.115139 ID - Schweizer2013 ER - TY - JOUR AU - Green, T. R. AU - Ryan, C. A. PY - 1972 DA - 1972// TI - Wound-induced proteinase inhibitor in plant leaves - possible defense mechanism against insects JO - Science VL - 175 UR - https://doi.org/10.1126/science.175.4023.776 DO - 10.1126/science.175.4023.776 ID - Green1972 ER - TY - JOUR AU - Li, L. AU - Li, C. AU - Lee, G. I. AU - Howe, G. A. PY - 2002 DA - 2002// TI - Distinct roles for jasmonate synthesis and action in the systemic wound response of tomato JO - Proc Natl Acad Sci U S A VL - 99 UR - https://doi.org/10.1073/pnas.072072599 DO - 10.1073/pnas.072072599 ID - Li2002 ER - TY - JOUR AU - Koo, A. J. AU - Gao, X. AU - Jones, A. D. AU - Howe, G. A. PY - 2009 DA - 2009// TI - A rapid wound signal activates the systemic synthesis of bioactive jasmonates in Arabidopsis JO - Plant J VL - 59 UR - https://doi.org/10.1111/j.1365-313X.2009.03924.x DO - 10.1111/j.1365-313X.2009.03924.x ID - Koo2009 ER - TY - JOUR AU - Mousavi, S. A. AU - Chauvin, A. AU - Pascaud, F. AU - Kellenberger, S. AU - Farmer, E. E. PY - 2013 DA - 2013// TI - GLUTAMATE RECEPTOR-LIKE genes mediate leaf-to-leaf wound signalling JO - Nature VL - 500 UR - https://doi.org/10.1038/nature12478 DO - 10.1038/nature12478 ID - Mousavi2013 ER - TY - JOUR AU - Miller, G. AU - Schlauch, K. AU - Tam, R. AU - Cortes, D. AU - Torres, M. A. AU - Shulaev, V. AU - Dangl, J. L. AU - Mittler, R. PY - 2009 DA - 2009// TI - The Plant NADPH Oxidase RBOHD Mediates Rapid Systemic Signaling in Response to Diverse Stimuli JO - Science Signaling VL - 2 UR - https://doi.org/10.1126/scisignal.2000448 DO - 10.1126/scisignal.2000448 ID - Miller2009 ER - TY - JOUR AU - Westwood, J. a. m. e. s. H. AU - Yoder, J. o. h. n. I. AU - Timko, M. i. c. h. a. e. l. P. AU - dePamphilis, C. l. a. u. d. e. W. PY - 2010 DA - 2010// TI - The evolution of parasitism in plants JO - Trends in Plant Science VL - 15 UR - https://doi.org/10.1016/j.tplants.2010.01.004 DO - 10.1016/j.tplants.2010.01.004 ID - Westwood2010 ER - TY - JOUR AU - Yoder, J. I. AU - Scholes, J. D. PY - 2010 DA - 2010// TI - Host plant resistance to parasitic weeds; recent progress and bottlenecks JO - Curr Opin Plant Biol VL - 13 UR - https://doi.org/10.1016/j.pbi.2010.04.011 DO - 10.1016/j.pbi.2010.04.011 ID - Yoder2010 ER - TY - JOUR AU - Costea, M. AU - García, M. A. AU - Stefanović, S. PY - 2015 DA - 2015// TI - A phylogenetically based infrageneric classification of the parasitic plant genus Cuscuta (dodders, Convolvulaceae) JO - Syst Bot VL - 40 UR - https://doi.org/10.1600/036364415X686567 DO - 10.1600/036364415X686567 ID - Costea2015 ER - TY - JOUR AU - Kim, G. AU - LeBlanc, M. L. AU - Wafula, E. K. AU - CW, d. P. AU - Westwood, J. H. PY - 2014 DA - 2014// TI - genomic-scale exchange of mRNA between a parasitic plant and its hosts JO - Science VL - 345 UR - https://doi.org/10.1126/science.1253122 DO - 10.1126/science.1253122 ID - Kim2014 ER - TY - JOUR AU - Shahid, S. a. i. m. a. AU - Kim, G. u. n. j. u. n. e. AU - Johnson, N. a. t. h. a. n. R. AU - Wafula, E. r. i. c. AU - Wang, F. e. n. g. AU - Coruh, C. e. y. d. a. AU - Bernal-Galeano, V. i. v. i. a. n. AU - Phifer, T. a. m. i. a. AU - dePamphilis, C. l. a. u. d. e. W. AU - Westwood, J. a. m. e. s. H. AU - Axtell, M. i. c. h. a. e. l. J. PY - 2018 DA - 2018// TI - MicroRNAs from the parasitic plant Cuscuta campestris target host messenger RNAs JO - Nature VL - 553 UR - https://doi.org/10.1038/nature25027 DO - 10.1038/nature25027 ID - Shahid2018 ER - TY - JOUR AU - Haupt, S. AU - Oparka, K. J. AU - Sauer, N. AU - Neumann, S. PY - 2001 DA - 2001// TI - Macromolecular trafficking between Nicotiana tabacum and the holoparasite Cuscuta reflexa JO - J Exp Bot VL - 52 UR - https://doi.org/10.1093/jexbot/52.354.173 DO - 10.1093/jexbot/52.354.173 ID - Haupt2001 ER - TY - JOUR AU - Hettenhausen, C. AU - Li, J. AU - Zhuang, H. AU - Sun, H. AU - Xu, Y. AU - Qi, J. AU - Zhang, J. AU - Lei, Y. AU - Qin, Y. AU - Sun, G. PY - 2017 DA - 2017// TI - Stem parasitic plant Cuscuta australis (dodder) transfers herbivory-induced signals among plants JO - Proc Natl Acad Sci U S A VL - 114 UR - https://doi.org/10.1073/pnas.1704536114 DO - 10.1073/pnas.1704536114 ID - Hettenhausen2017 ER - TY - JOUR AU - Zhuang, H. AU - Li, J. AU - Song, J. AU - Hettenhausen, C. AU - Schuman, M. C. AU - Sun, G. AU - Zhang, C. AU - Li, J. AU - Song, D. AU - Wu, J. PY - 2018 DA - 2018// TI - Aphid (Myzus persicae) feeding on the parasitic plant dodder (Cuscuta australis) activates defense responses in both the parasite and soybean host JO - New Phytol VL - 218 UR - https://doi.org/10.1111/nph.15083 DO - 10.1111/nph.15083 ID - Zhuang2018 ER - TY - JOUR AU - Harvey, T. L. PY - 1966 DA - 1966// TI - Aphids, Dodder (Cuscuta campestris), and Dodder–Host Plant Interrelations1 JO - Annals of the Entomological Society of America VL - 59 UR - https://doi.org/10.1093/aesa/59.6.1276 DO - 10.1093/aesa/59.6.1276 ID - Harvey1966 ER - TY - JOUR AU - Costea, M. AU - Tardif, F. J. PY - 2006 DA - 2006// TI - The biology of Canadian weeds. 133. Cuscuta campestris Yuncker, C. gronovii Willd. Ex Schult., C. umbrosa Beyr. Ex hook., C. epithymum (L.) L. and C. epilinum Weihe JO - Can J Plant Sci VL - 86 UR - https://doi.org/10.4141/P04-077 DO - 10.4141/P04-077 ID - Costea2006 ER - TY - JOUR AU - Lu, C. AU - Qi, J. AU - Hettenhausen, C. AU - Lei, Y. AU - Zhang, J. AU - Zhang, M. AU - Zhang, C. AU - Song, J. AU - Li, J. AU - Cao, G. PY - 2018 DA - 2018// TI - Elevated CO2 differentially affects tobacco and rice defense against lepidopteran larvae via the jasmonic acid signaling pathway JO - J Integr Plant Biol VL - 60 UR - https://doi.org/10.1111/jipb.12633 DO - 10.1111/jipb.12633 ID - Lu2018 ER - TY - JOUR AU - Runyon, J. B. AU - Mescher, M. C. AU - Felton, G. W. AU - Moraes, C. M. PY - 2010 DA - 2010// TI - Parasitism by Cuscuta pentagona sequentially induces JA and SA defence pathways in tomato JO - Plant Cell Environ VL - 33 UR - https://doi.org/10.1111/j.1365-3040.2009.02082.x DO - 10.1111/j.1365-3040.2009.02082.x ID - Runyon2010 ER - TY - JOUR AU - Jassbi, A. R. AU - Gase, K. AU - Hettenhausen, C. AU - Schmidt, A. AU - Baldwin, I. T. PY - 2008 DA - 2008// TI - Silencing geranylgeranyl diphosphate synthase in Nicotiana attenuata dramatically impairs resistance to tobacco hornworm JO - Plant Physiol VL - 146 UR - https://doi.org/10.1104/pp.107.108811 DO - 10.1104/pp.107.108811 ID - Jassbi2008 ER - TY - JOUR AU - Bozorov, T. A. AU - Dinh, S. T. AU - Baldwin, I. T. PY - 2017 DA - 2017// TI - JA but not JA-Ile is the cell-nonautonomous signal activating JA mediated systemic defenses to herbivory in Nicotiana attenuata JO - J Integr Plant Biol VL - 59 UR - https://doi.org/10.1111/jipb.12545 DO - 10.1111/jipb.12545 ID - Bozorov2017 ER - TY - JOUR AU - Sun, G. AU - Xu, Y. AU - Liu, H. AU - Sun, T. AU - Zhang, J. AU - Hettenhausen, C. AU - Shen, G. AU - Qi, J. AU - Qin, Y. AU - Li, J. PY - 2018 DA - 2018// TI - Large-scale gene losses underlie the genome evolution of parasitic plant Cuscuta australis JO - Nat Commun VL - 9 UR - https://doi.org/10.1038/s41467-018-04721-8 DO - 10.1038/s41467-018-04721-8 ID - Sun2018 ER - TY - JOUR AU - Vogel, A. AU - Schwacke, R. AU - Denton, A. K. AU - Usadel, B. AU - Hollmann, J. AU - Fischer, K. AU - Bolger, A. AU - Schmidt, M. H. AU - Bolger, M. E. AU - Gundlach, H. PY - 2018 DA - 2018// TI - Footprints of parasitism in the genome of the parasitic flowering plant Cuscuta campestris JO - Nat Commun VL - 9 UR - https://doi.org/10.1038/s41467-018-04344-z DO - 10.1038/s41467-018-04344-z ID - Vogel2018 ER - TY - JOUR AU - Stefanovic, S. AU - Kuzmina, M. AU - Costea, M. PY - 2007 DA - 2007// TI - Delimitation of major lineages within Cuscuta subgenus Grammica (convolvulaceae) using plastid and nuclear DNA sequences JO - Am J of Bot VL - 94 UR - https://doi.org/10.3732/ajb.94.4.568 DO - 10.3732/ajb.94.4.568 ID - Stefanovic2007 ER - TY - JOUR AU - Hettenhausen, C. AU - Heinrich, M. AU - Baldwin, I. T. AU - Wu, J. PY - 2014 DA - 2014// TI - Fatty acid-amino acid conjugates are essential for systemic activation of salicylic acid-induced protein kinase and accumulation of jasmonic acid in Nicotiana attenuata JO - BMC Plant Biol VL - 14 UR - https://doi.org/10.1186/s12870-014-0326-z DO - 10.1186/s12870-014-0326-z ID - Hettenhausen2014 ER - TY - JOUR AU - Wu, J. AU - Hettenhausen, C. AU - Meldau, S. AU - Baldwin, I. T. PY - 2007 DA - 2007// TI - Herbivory rapidly activates MAPK signaling in attacked and unattacked leaf regions but not between leaves of Nicotiana attenuata JO - Plant Cell VL - 19 UR - https://doi.org/10.1105/tpc.106.049353 DO - 10.1105/tpc.106.049353 ID - Wu2007 ER - TY - JOUR AU - Li, J. AU - Hettenhausen, C. AU - Sun, G. AU - Zhuang, H. AU - Li, J. H. AU - Wu, J. PY - 2015 DA - 2015// TI - The parasitic plant Cuscuta australis is highly insensitive to abscisic acid-induced suppression of hypocotyl elongation and seed germination JO - PLoS One VL - 10 UR - https://doi.org/10.1371/journal.pone.0135197 DO - 10.1371/journal.pone.0135197 ID - Li2015 ER - TY - JOUR AU - Sierro, N. AU - Battey, J. N. AU - Ouadi, S. AU - Bakaher, N. AU - Bovet, L. AU - Willig, A. AU - Goepfert, S. AU - Peitsch, M. C. AU - Ivanov, N. V. PY - 2014 DA - 2014// TI - The tobacco genome sequence and its comparison with those of tomato and potato JO - Nat Commun VL - 5 UR - https://doi.org/10.1038/ncomms4833 DO - 10.1038/ncomms4833 ID - Sierro2014 ER - TY - JOUR AU - Kim, D. AU - Langmead, B. AU - Salzberg, S. L. PY - 2015 DA - 2015// TI - HISAT: a fast spliced aligner with low memory requirements JO - Nat Methods VL - 12 UR - https://doi.org/10.1038/nmeth.3317 DO - 10.1038/nmeth.3317 ID - Kim2015 ER - TY - JOUR AU - Pertea, M. AU - Pertea, G. M. AU - Antonescu, C. M. AU - Chang, T. C. AU - Mendell, J. T. AU - Salzberg, S. L. PY - 2015 DA - 2015// TI - StringTie enables improved reconstruction of a transcriptome from RNA-seq reads JO - Nat Biotechnol VL - 33 UR - https://doi.org/10.1038/nbt.3122 DO - 10.1038/nbt.3122 ID - Pertea2015 ER - TY - JOUR AU - Anders, S. AU - Huber, W. PY - 2010 DA - 2010// TI - Differential expression analysis for sequence count data JO - Genome Biol VL - 11 UR - https://doi.org/10.1186/gb-2010-11-10-r106 DO - 10.1186/gb-2010-11-10-r106 ID - Anders2010 ER - TY - STD TI - The Gene Ontology C. Expansion of the Gene Ontology knowledgebase and resources. Nucleic Acids Res. 2017. 45(D1):D331–D338. ID - ref38 ER - TY - JOUR AU - Ashburner, M. AU - Ball, C. A. AU - Blake, J. A. AU - Botstein, D. AU - Butler, H. AU - Cherry, J. M. AU - Davis, A. P. AU - Dolinski, K. AU - Dwight, S. S. AU - Eppig, J. T. PY - 2000 DA - 2000// TI - Gene ontology: tool for the unification of biology. The gene ontology consortium JO - Nat Genet VL - 25 UR - https://doi.org/10.1038/75556 DO - 10.1038/75556 ID - Ashburner2000 ER - TY - JOUR AU - Alexa, A. AU - Rahnenfuhrer, J. AU - Lengauer, T. PY - 2006 DA - 2006// TI - Improved scoring of functional groups from gene expression data by decorrelating GO graph structure JO - Bioinformatics VL - 22 UR - https://doi.org/10.1093/bioinformatics/btl140 DO - 10.1093/bioinformatics/btl140 ID - Alexa2006 ER - TY - JOUR AU - Heiling, S. v. e. n. AU - Schuman, M. e. r. e. d. i. t. h. C. AU - Schoettner, M. a. t. t. h. i. a. s. AU - Mukerjee, P. u. r. b. a. AU - Berger, B. e. a. t. r. i. c. e. AU - Schneider, B. e. r. n. d. AU - Jassbi, A. m. i. r. R. AU - Baldwin, I. a. n. T. PY - 2010 DA - 2010// TI - Jasmonate and ppHsystemin Regulate Key Malonylation Steps in the Biosynthesis of 17-Hydroxygeranyllinalool Diterpene Glycosides, an Abundant and Effective Direct Defense against Herbivores in Nicotiana attenuata JO - The Plant Cell VL - 22 UR - https://doi.org/10.1105/tpc.109.071449 DO - 10.1105/tpc.109.071449 ID - Heiling2010 ER - TY - JOUR AU - Dam, N. M. AU - Horn, M. AU - Mares, M. AU - Baldwin, I. T. PY - 2001 DA - 2001// TI - Ontogeny constrains systemic protease inhibitor response in Nicotiana attenuata JO - J Chem Ecol VL - 27 UR - https://doi.org/10.1023/A:1010341022761 DO - 10.1023/A:1010341022761 ID - Dam2001 ER -