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Table 2 DEGs influenced by both MT (100 μM) and NAA (4.5 μM) treatment, as compared to control

From: Direct comparison of Arabidopsis gene expression reveals different responses to melatonin versus auxin

Gene ID

Annotation

MT

NAA

FDRa

Log2 (Fold Change)

FDRa

Log2 (Fold Change)

Kinases (3)

 AT1G21240

Wall-associated kinase 3, WAK3

1.1E-02

3.55

9.3E-05

3.91

 AT4G18250

Receptor serine/threonine kinase-like

7.7E-03

3.43

1.5E-03

3.07

 AT1G21250

Wall-associated kinase 1, WAK1

3.7E-02

1.55

1.1E-12

3.18

Transcription factors (1)

 AT2G16720

Myb domain protein 7, MYB7

1.9E-03

1.81

5.0E-03

1.36

Senescence (1)

 AT5G13170

Senescence-associated gene, SAG12

3.9E-02

−1.46

2.7E-10

2.70

Transporter (1)

 AT1G15520

ABC transporter family, ABCG40

5.8E-03

3.01

2.2E-04

3.00

Oxidation-reduction process (1)

 AT4G04840

Methionine sulfoxide reductase, MSRB6

1.0E-02

−1.36

2.5E-18

3.05

Lipid metabolic process (3)

 AT3G48080

Alpha-beta hydrolases ABH

1.0E-05

2.68

5.8E-10

3.16

 AT2G26400

Acireductone dioxygenase, ARD3

4.4E-02

2.62

2.2E-03

2.62

 AT3G22231

Pathogen circadian controlled PCC1

2.9E-02

2.95

4.6E-09

4.98

Plant type hypersensitive response (1)

 AT3G50480

Homolog of RPW8, HR4

1.9E-03

3.03

4.3E-02

1.70

Induced systemic resistance (1)

 AT1G32960

Subtilase family protein, ATSBT3.3

1.9E-02

2.90

1.7E-02

2.21

Response to other organisms (2)

  AT2G14560

Late upregulated in response to downy mildew LURP1

2.4E-02

2.90

3.0E-10

5.13

 AT5G25250

Flotillin-like protein 1, FLOT1

1.9E-03

2.61

1.1E-3

2.18

Regulation of phenylpropanoid metabolic process (1)

 AT2G44130

Galactose/oxidase kelch repeat protein

4.6E-05

3.40

3.4E-2

3.06

Response to abiotic stresses (2)

 AT1G14880

Plant cadmium resistance1, PCR1

5.5E-03

6.55

2.4E-2

4.33

 AT4G02520

Glutathione-S transferase GSTF2

1.3E-03

1.82

4.9E-5

1.80

Miscellaneous (4)

 AT1G10340

Ankyrin repeat family protein

1.0E-02

2.37

2.1E-2

1.7

 AT2G44480

Beta glucosidase 17, BGLU17

3.3E-02

1.81

1.2E-3

1.84

 AT5G55450

Bifunctional inhibitor/lipid transfer, ATLTP4.4

3.9E-04

1.47

1.0E-02

3.01

 AT5G53830

VQ-motif containing protein, MVQ3

1.9E-03

1.25

4.3E-06

1.41

  1. a FDR = False Discovery Rate