Table 1 Quality of the sequencing data
Sample | Raw reads | Raw bases | Clean reads | Clean bases | Valid bases | Q30 | GC |
|---|---|---|---|---|---|---|---|
Gb_GL1 | 165.33 M | 24.80 G | 155.75 M | 22.39 G | 90.30% | 92.07% | 43.17% |
Gb_GL2 | 164.41 M | 24.66 G | 154.79 M | 22.27 G | 90.32% | 92.47% | 43.22% |
Gb_GL3 | 163.97 M | 24.60 G | 154.84 M | 22.41 G | 91.11% | 92.79% | 42.97% |
Gb_YL1 | 165.47 M | 24.82 G | 156.14 M | 22.38 G | 90.16% | 92.13% | 42.69% |
Gb_YL2 | 165.07 M | 24.76 G | 156.08 M | 22.58 G | 91.19% | 92.43% | 42.55% |
Gb_YL3 | 163.88 M | 24.58 G | 153.92 M | 22.03 G | 89.61% | 91.69% | 42.74% |