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Table 2 Uni-genes annotated into ubiquitin-mediated proteolysis and phosphatidylinositol signaling system

From: PI signal transduction and ubiquitination respond to dehydration stress in the red seaweed Gloiopeltis furcata under successive tidal cycles

Gene IDFold changeKMEAnnotation
CGFD4.5FD6.0FR5.5FR6.0SD4.5SD6.0SR6.0
Ubiquitin mediated proteolysis
 Gf075121.001.621.680.300.000.031.681.330.99Transcription elongation factor B polypeptide 1
 Gf185421.001.451.600.180.000.051.430.910.99RING-box protein 1
 Gf326201.001.240.990.000.000.001.240.960.97Histone deacetylase complex subunit Cti6
 Gf160901.002.432.210.140.000.001.731.090.97E3 ubiquitin-protein ligase TRIP12
 Gf279691.001.761.700.000.000.001.090.950.97Ubiquitin-protein ligase E3
 Gf185361.001.621.500.190.000.031.001.010.97E3 ubiquitin-protein ligase UPL3
 Gf086251.003.303.000.080.000.152.842.120.97Elogin binding protein-like protein, partial
 Gf192661.001.841.280.000.000.001.201.410.96Unnamed protein product
 Gf184801.001.582.300.000.000.002.001.230.96TPR repeat-containing protein
 Gf139031.001.331.020.480.400.451.210.760.95Peptidyl-prolyl cis-trans isomerase-like 2
 Gf192641.002.901.740.200.000.021.701.370.94Unnamed protein product
 Gf307751.003.181.680.050.000.062.701.610.94ERAD-associated E3 ubiquitin-protein ligase
 Gf149891.001.921.810.000.000.000.881.500.92Unnamed protein product
 Gf187421.000.971.450.000.000.071.571.430.92Ubiquitin-activating enzyme E1
 Gf192631.002.341.160.010.000.001.071.120.91SUMO-activating enzyme subunit 2
 Gf192651.002.290.740.000.000.001.251.030.87SUMO-activating enzyme subunit 2
 Gf112321.001.502.060.830.000.121.271.420.89Ubiquitin-conjugating enzyme E2 34-like
 Gf062471.001.735.960.110.000.004.014.290.78E3 ubiquitin-protein ligase
 Gf105621.001.731.450.460.320.400.561.690.75Ubiquitin carrier protein
Phosphatidylinositol signaling system
 Gf038411.000.920.941.181.171.171.060.92−0.87IP6, PP-IP5 or IP7 kinase
 Gf074431.002.231.620.000.000.011.621.820.96Calmodulin
 Gf089931.002.273.210.030.000.002.393.030.913′(2′),5′-bisphosphate nucleotidase, SAL3
 Gf139821.001.220.990.550.810.791.020.710.74Inositol-hexakisphosphate kinase
 Gf142331.001.161.430.260.000.121.030.840.96Phospholipase C (by KO-ID)
 Gf187771.004.851.840.000.000.001.831.450.82Inositol-1,3,4-trisphosphate 5/6-kinase
 Gf309931.000.710.600.690.750.700.920.870.193 (2) -bisphosphate nucleotidase
 Gf314391.001.441.080.690.170.330.950.210.72Calmodulin 1
  1. The expression level of the genes were shown as fold changes of RPKM comparing to CG. Any fold change higher than 1.5 in four dehydration treatments (FD 4.5, FD6.0, SD4.5, SD6.0) considered as significant increases and used bold type