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Table 2 Uni-genes annotated into ubiquitin-mediated proteolysis and phosphatidylinositol signaling system

From: PI signal transduction and ubiquitination respond to dehydration stress in the red seaweed Gloiopeltis furcata under successive tidal cycles

Gene ID

Fold change

KME

Annotation

CG

FD4.5

FD6.0

FR5.5

FR6.0

SD4.5

SD6.0

SR6.0

Ubiquitin mediated proteolysis

 Gf07512

1.00

1.62

1.68

0.30

0.00

0.03

1.68

1.33

0.99

Transcription elongation factor B polypeptide 1

 Gf18542

1.00

1.45

1.60

0.18

0.00

0.05

1.43

0.91

0.99

RING-box protein 1

 Gf32620

1.00

1.24

0.99

0.00

0.00

0.00

1.24

0.96

0.97

Histone deacetylase complex subunit Cti6

 Gf16090

1.00

2.43

2.21

0.14

0.00

0.00

1.73

1.09

0.97

E3 ubiquitin-protein ligase TRIP12

 Gf27969

1.00

1.76

1.70

0.00

0.00

0.00

1.09

0.95

0.97

Ubiquitin-protein ligase E3

 Gf18536

1.00

1.62

1.50

0.19

0.00

0.03

1.00

1.01

0.97

E3 ubiquitin-protein ligase UPL3

 Gf08625

1.00

3.30

3.00

0.08

0.00

0.15

2.84

2.12

0.97

Elogin binding protein-like protein, partial

 Gf19266

1.00

1.84

1.28

0.00

0.00

0.00

1.20

1.41

0.96

Unnamed protein product

 Gf18480

1.00

1.58

2.30

0.00

0.00

0.00

2.00

1.23

0.96

TPR repeat-containing protein

 Gf13903

1.00

1.33

1.02

0.48

0.40

0.45

1.21

0.76

0.95

Peptidyl-prolyl cis-trans isomerase-like 2

 Gf19264

1.00

2.90

1.74

0.20

0.00

0.02

1.70

1.37

0.94

Unnamed protein product

 Gf30775

1.00

3.18

1.68

0.05

0.00

0.06

2.70

1.61

0.94

ERAD-associated E3 ubiquitin-protein ligase

 Gf14989

1.00

1.92

1.81

0.00

0.00

0.00

0.88

1.50

0.92

Unnamed protein product

 Gf18742

1.00

0.97

1.45

0.00

0.00

0.07

1.57

1.43

0.92

Ubiquitin-activating enzyme E1

 Gf19263

1.00

2.34

1.16

0.01

0.00

0.00

1.07

1.12

0.91

SUMO-activating enzyme subunit 2

 Gf19265

1.00

2.29

0.74

0.00

0.00

0.00

1.25

1.03

0.87

SUMO-activating enzyme subunit 2

 Gf11232

1.00

1.50

2.06

0.83

0.00

0.12

1.27

1.42

0.89

Ubiquitin-conjugating enzyme E2 34-like

 Gf06247

1.00

1.73

5.96

0.11

0.00

0.00

4.01

4.29

0.78

E3 ubiquitin-protein ligase

 Gf10562

1.00

1.73

1.45

0.46

0.32

0.40

0.56

1.69

0.75

Ubiquitin carrier protein

Phosphatidylinositol signaling system

 Gf03841

1.00

0.92

0.94

1.18

1.17

1.17

1.06

0.92

−0.87

IP6, PP-IP5 or IP7 kinase

 Gf07443

1.00

2.23

1.62

0.00

0.00

0.01

1.62

1.82

0.96

Calmodulin

 Gf08993

1.00

2.27

3.21

0.03

0.00

0.00

2.39

3.03

0.91

3′(2′),5′-bisphosphate nucleotidase, SAL3

 Gf13982

1.00

1.22

0.99

0.55

0.81

0.79

1.02

0.71

0.74

Inositol-hexakisphosphate kinase

 Gf14233

1.00

1.16

1.43

0.26

0.00

0.12

1.03

0.84

0.96

Phospholipase C (by KO-ID)

 Gf18777

1.00

4.85

1.84

0.00

0.00

0.00

1.83

1.45

0.82

Inositol-1,3,4-trisphosphate 5/6-kinase

 Gf30993

1.00

0.71

0.60

0.69

0.75

0.70

0.92

0.87

0.19

3 (2) -bisphosphate nucleotidase

 Gf31439

1.00

1.44

1.08

0.69

0.17

0.33

0.95

0.21

0.72

Calmodulin 1

  1. The expression level of the genes were shown as fold changes of RPKM comparing to CG. Any fold change higher than 1.5 in four dehydration treatments (FD 4.5, FD6.0, SD4.5, SD6.0) considered as significant increases and used bold type