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Table 2 QTLs for seed tocopherol contents in RILs of TK780 and B04009 cross

From: Identification of quantitative trait loci for increased α-tocopherol biosynthesis in wild soybean using a high-density genetic map

TraitYear testedQTL-ChrPosition (cM)Support interval (cM)LOD scorePVE (%)Additive effect of B04009 allele Flanking marker1)
α-Toc
content (μg/g)
2016qαTC-5142141.5–144.56.19.2−7.6S05_37473691/ S05_37803884
qαTC-99291.5–92.514.328.712.9S09_43927286 /S09_44366371
qαTC-11198193.5–198.54.05.8−5.8S11_31748669 / S11_32054530
qαTC-1232.5–3.57.812.78.6S12_2207593/ S12_2310293
2017qαTC-99291.5–92.513.139.411.2S09_43927286 / S09_44366371
qαTC-111)196191.5–198.53.22)8.4−5.2S11_31748669 / S11_32054530
qαTC-1210–1.56.014.76.9S12_1507927/ S12_1790872
δ-Toc
content (μg/g)
2017qδTC-44342.5–45.55.59.66.9S04_6780105 / S04_7188146
qδTC-6117116.5–118.54.77.96.1S06_42091687 / S06_43647797
qδTC-197978.5–79.514.132.4−12.4S19_37454169 / S19_38007384
γ-Toc
content (μg/g)
2016qγTC-79796.5–99.54.016.4−19.8S07_19171390 /
S07_19946051
2017qγTC-67574.5–76.55.67.313.9S06_14027025 / S06_14268479
qγTC-132016.5–20.56.88.6−14.8S13_14124674/
S13_14460816
qγTC-149190.5–91.57.79.916.1S14_25722294 / S14_30081672
Total-Toc content (μg/g)2016qTTC-1141139.5–141.55.522.5−27.1S01_52482586 / S01_53582878
  1. 1) Physical positions of the QTL support intervals are indicated in the flanking marker names. The two digits after S represent the chromosome, while the number after the underline represents the physical position on the reference genome Williams82.a2
  2. 2) p = 0.066
  3. PVE = percent of variation explained (%)