Table 2 QTLs for seed tocopherol contents in RILs of TK780 and B04009 cross
Trait | Year tested | QTL-Chr | Position (cM) | Support interval (cM) | LOD score | PVE (%) | Additive effect of B04009 allele | Flanking marker1) |
|---|---|---|---|---|---|---|---|---|
α-Toc content (μg/g) | 2016 | qαTC-5 | 142 | 141.5–144.5 | 6.1 | 9.2 | −7.6 | S05_37473691/ S05_37803884 |
qαTC-9 | 92 | 91.5–92.5 | 14.3 | 28.7 | 12.9 | S09_43927286 /S09_44366371 | ||
qαTC-11 | 198 | 193.5–198.5 | 4.0 | 5.8 | −5.8 | S11_31748669 / S11_32054530 | ||
qαTC-12 | 3 | 2.5–3.5 | 7.8 | 12.7 | 8.6 | S12_2207593/ S12_2310293 | ||
2017 | qαTC-9 | 92 | 91.5–92.5 | 13.1 | 39.4 | 11.2 | S09_43927286 / S09_44366371 | |
qαTC-111) | 196 | 191.5–198.5 | 3.22) | 8.4 | −5.2 | S11_31748669 / S11_32054530 | ||
qαTC-12 | 1 | 0–1.5 | 6.0 | 14.7 | 6.9 | S12_1507927/ S12_1790872 | ||
δ-Toc content (μg/g) | 2017 | qδTC-4 | 43 | 42.5–45.5 | 5.5 | 9.6 | 6.9 | S04_6780105 / S04_7188146 |
qδTC-6 | 117 | 116.5–118.5 | 4.7 | 7.9 | 6.1 | S06_42091687 / S06_43647797 | ||
qδTC-19 | 79 | 78.5–79.5 | 14.1 | 32.4 | −12.4 | S19_37454169 / S19_38007384 | ||
γ-Toc content (μg/g) | 2016 | qγTC-7 | 97 | 96.5–99.5 | 4.0 | 16.4 | −19.8 | S07_19171390 / S07_19946051 |
2017 | qγTC-6 | 75 | 74.5–76.5 | 5.6 | 7.3 | 13.9 | S06_14027025 / S06_14268479 | |
qγTC-13 | 20 | 16.5–20.5 | 6.8 | 8.6 | −14.8 | S13_14124674/ S13_14460816 | ||
qγTC-14 | 91 | 90.5–91.5 | 7.7 | 9.9 | 16.1 | S14_25722294 / S14_30081672 | ||
Total-Toc content (μg/g) | 2016 | qTTC-1 | 141 | 139.5–141.5 | 5.5 | 22.5 | −27.1 | S01_52482586 / S01_53582878 |