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Table 1 The motifs of R protein sequences identified by MEME

From: Colonisation of Oncidium orchid roots by the endophyte Piriformospora indica restricts Erwinia chrysanthemi infection, stimulates accumulation of NBS-LRR resistance gene transcripts and represses their targeting micro-RNAs in leaves

No. Best match NBS motif E-value
1 FCxxFxQDHxFDKDDLVRMW   9.1− 310
2 LsVVGH/MGGMKxTLLQHVY P-loop 1.0− 295
3 MVxKLxGC/SPLAAKVIGGILN GLPL 7.8− 266
4 SYxxLPxxLxxCFxFCxxFP RNBS-D 8.3−250
5 FxVK/QxW/FV/ACVSxNFxAxxVIX RNBS-A-non-TIR 1.4−266
6 xYKMHDLLHELAQS/EVSxxEx MHD-like 3.1− 256
7 VLAPLxxGSS/LGSKxLITTRx RNBS-B 2.2−259
8 DxGRcYFN/DILVxxSFFDEFx   9.9− 245
9 D/ExCLxLF/LxxH/YAFA/FGVENPDD RNBS-C 2.2− 243
10 KRFLL/IVxDDI/VWExDExxWxN Kinase-2 5.2−234
  1. *If the bit value of the amino acid at this position is < 1, it is replaced by an x; conserved amino acid sequences are shown in bold letters