From: Mapping of resistance to corn borers in a MAGIC population of maize
Significant SNPa | bin | A509 | EP125 | EP17 | EP43 | EP53 | EP86 | F473 | PB130 | Allelesb | (No)c | Additive effectd | p-value e | R2 f | Previous experiments with co-localizing QTLg |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S1_19252698 | 1.02 | C | T | T | C | C | C | C | T | C/T | 381/132 | 1.65 | 4.6E-05 | 0.03 | |
S1_290934634 | 1.11 | T | T | T | C | T | N | T | N | C/T | 64/274 | 2.13 | 9.9E-05 | 0.05 | Â |
S2_14798875 | 2.02 | T | C | N | C | C | C | N | C | T/C | 212/242 | 1.48 | 9.76E-05 | 0.03 | Â |
S2_179803199 | 2.07 | A | G | G | G | G | N | G | A | A/G | 170/348 | 1.49 | 9.9E-05 | 0.03 | |
S3_191332395 | 3.07 | N | G | N | N | G | C | N | G | C/G | 138/269 | 2.01 | 4.7E-06 | 0.05 | ECB European Dent [30] |
S3_212770896 | 3.08 | Â | Â | Â | Â | Â | Â | Â | Â | G/C | 60/451 | 2.16 | 7.16E-05 | 0.03 | Â |
S3_218807815 | 3.09 | G | G | G | G | G | G | N | T | G/T | 396/81 | 1.87 | 9.4E-05 | 0.03 | ECB D06xD408 [52] |
S3_218807820 | 3.09 | G | G | G | G | G | G | N | A | G/A | 397/80 | 1.92 | 6.5E-05 | 0.03 | Â |
S4_127856740 | 4.05 | T | N | G | G | N | G | G | G | G/T | 372/97 | 1.88 | 8.0E-05 | 0.03 | Â |
S4_127955231 | 4.05 | A | A | G | G | N | G | G | G | G/A | 399/128 | 1.77 | 3.6E-05 | 0.03 | Â |
S4_155128691 | 4.06 | T | T | T | N | T | N | T | T | G/T | 63/345 | 2.38 | 1.2E-05 | 0.05 | Â |
S4_155830369 | 4.06 | C | N | C | N | C | C | N | C | T/C | 43/361 | 2.55 | 3.2E-05 | 0.05 | Â |
S4_155830370 | 4.06 | T | N | T | N | T | T | N | T | G/T | 43/361 | 2.55 | 3.2E-05 | 0.05 | Â |
S4_155830400 | 4.06 | G | N | G | N | G | G | N | G | T/G | 43/361 | 2.55 | 3.2 E05 | 0.05 | Â |
S4_156193095 | 4.06 | C | C | C | N | N | C | T | C | T/C | 78/308 | 2.32 | 2.8E-06 | 0.06 | Â |
S4_181340312 | 4.09 | C | T | N | N | C | T | N | N | T/C | 207/144 | 1.69 | 9.3 E05 | 0.04 | Â |
S4_221752511 | 4.09 | N | N | G | G | N | G | G | G | A/G | 19/282 | 3.68 | 7.1 E05 | 0.05 | Â |
S5_24771445 | 5.03 | A | N | G | G | G | A | G | G | G/A | 345/117 | 1.82 | 2.4E-05 | 0.04 | |
S6_147725553 | 6.05 | A | A | N | A | N | N | N | N | A/T | 401/49 | 2.50 | 4.6E-05 | 0.04 | ECB B73xDe811 [51]; MCB B73xCML103 [20]; MCB EP125xPB130 [49] |
S6_150800759 | 6.05 | A | A | N | A | G | G | G | G | A/G | 247/264 | 1.42 | 7.0E-05 | 0.03 | Â |
S6_156035854 | 6.06 | A | N | A | A | A | N | C | C | A/C | 356/179 | 1.46 | 8.2E-05 | 0.03 | |
S6_164776991 | 6.07 | N | A | G | A | G | G | A | G | G/A | 347/168 | 1.55 | 4.5E-05 | 0.03 | |
S7_109722251 | 7.02 | G | A | A | A | N | N | G | N | G/A | 244/246 | 1.42 | 9.9E-05 | 0.03 | ECB B73xB52 [53] |
S8_24527783 | 8.03 | N | G | G | G | N | N | G | G | T/G | 27/393 | 3.00 | 9.4E-05 | 0.04 | ECB B73xMo47 [50] |
S8_28525990 | 8.03 | T | G | G | G | G | G | G | G | T/G | 59/502 | 2.16 | 8.2 E05 | 0.03 | Â |
S8_28526020 | 8.03 | A | C | C | C | C | C | C | C | A/C | 59/503 | 2.16 | 8.1E-05 | 0.03 | Â |
S8_28526026 | 8.03 | C | A | A | A | A | A | A | A | C/A | 59/503 | 2.16 | 8.1 E05 | 0.03 | Â |