Table 4 Description of ‘Tanabe54’, ‘Tosashimizu64’ and consensus linkage maps
LGa | Tanabe54′ (maternal) | LG | Tosashimizu64’ (paternal) | LG | Consensus | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
gSSR | EST-SSR | SNPs | Length (cM) | Avg. marker distance (cM) | Max. gap (cM) | gSSR | EST-SSR | SNPs | Length (cM) | Avg. marker distance (cM) | Max. gap (cM) | gSSR | EST-SSR | SNPs | Length (cM) | Avg. marker distance (cM) | Max. gap (cM) | |||
01 | 2 | 3 | 13 | 121.9 | 7.2 | 32.1 | 01 | 1 | 1 | 27 | 99.8 | 3.6 | 14.2 | 01 | 3 | 4 | 49 | 122.5 | 2.2 | 14.4 |
02 | 3 | 1 | 7 | 88.9 | 8.9 | 37.7 | 02 | 4 | 2 | 18 | 139.5 | 6.1 | 26.2 | 02 | 6 | 2 | 30 | 98.7 | 2.7 | 15.5 |
03 | 4 | 2 | 7 | 105.5 | 8.8 | 35.1 | 03 | 4 | 2 | 9 | 127.2 | 9.1 | 27.1 | 03 | 4 | 2 | 20 | 109.3 | 4.4 | 15.7 |
04 | 2 | 2 | 8 | 75.9 | 6.9 | 23.9 | 04 | 4 | 1 | 15 | 135.0 | 7.1 | 23.6 | 04 | 6 | 2 | 31 | 123.1 | 3.3 | 12.3 |
05 | 2 | 1 | 12 | 110.1 | 7.9 | 30.1 | 05 | 4 | 2 | 19 | 136.0 | 5.7 | 31.7 | 05 | 6 | 3 | 37 | 130.4 | 3.0 | 12.0 |
06 | 4 | 2 | 9 | 121.6 | 8.7 | 29.7 | 06 | 1 | 3 | 16 | 114.0 | 6.0 | 30.1 | 06 | 4 | 4 | 32 | 131.6 | 3.4 | 30.1 |
07 | 3 | 0 | 10 | 113.9 | 9.5 | 34.7 | 07 | 3 | 1 | 13 | 129.4 | 8.1 | 32.0 | 07 | 5 | 1 | 33 | 152.0 | 4.0 | 32.1 |
08 | 4 | 1 | 7 | 113.2 | 10.3 | 18.8 | 08 | 1 | 2 | 17 | 116.2 | 6.1 | 33.2 | 08 | 4 | 3 | 31 | 114.4 | 3.1 | 16.0 |
09 | 5 | 1 | 8 | 82.9 | 6.4 | 24.9 | 09 | 4 | 0 | 14 | 95.6 | 5.6 | 29.7 | 09 | 6 | 1 | 27 | 94.8 | 2.9 | 16.1 |
10 | 0 | 1 | 14 | 113.8 | 8.1 | 19.5 | 10 | 0 | 1 | 12 | 94.9 | 7.9 | 36.9 | 10 | 0 | 1 | 30 | 114.8 | 3.8 | 19.5 |
11 | 3 | 0 | 5 | 83.7 | 12.0 | 15.9 | 11 | 4 | 3 | 15 | 90.3 | 4.3 | 13.2 | 11 | 4 | 3 | 25 | 93.1 | 3.0 | 9.7 |
12–1 | 7 | 0 | 6 | 63.2 | 5.3 | 27.4 | 12 | 10 | 2 | 13 | 120.0 | 5.0 | 15.6 | 12 | 11 | 2 | 24 | 118.9 | 3.3 | 12.6 |
12–2 | 0 | 0 | 2 | 4.3 | – | – |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
13 | 1 | 0 | 5 | 15.7 | 3.1 | 5.0 | 13 | 0 | 0 | 2 | 16.7 | – | – | – | – | – | – | – | – | – |
|  |  |  |  |  |  |  | 14 | 0 | 0 | 2 | 7.5 | – | – | – | – | – | – | – | – | – |
Total | 40 | 14 | 113 | 1214.6 | 7.9 | 25.8 | Total | 40 | 20 | 192 | 1422.1 | 6.2 | 26.1 | Total | 59 | 28 | 369 | 1403.6 | 3.3 | 17.2 |