Table 2 Detailed information about the haplotype-based map construction for the Argentinean wheat collection
Chr. | SNPs/ | Haplotype | HB3 | SNPs per HB | HB size4 | HB spacing4 | |||
|---|---|---|---|---|---|---|---|---|---|
SG1 | GM2 | count | count | Avg. | Max. | Avg. | Max. | Avg. | Max. |
1A | 431 | 244 | 66 | 6.2 | 26 | 4.5 | 59.4 | 3.4 | 125.4 |
1B | 919 | 327 | 91 | 9.7 | 168 | 5.8 | 115.6 | 1.3 | 21.6 |
1D | 253 | 74 | 22 | 10.8 | 90 | 8.5 | 48.8 | 10.0 | 115.8 |
2A | 421 | 239 | 70 | 5.4 | 60 | 7.9 | 166.7 | 2.1 | 26.7 |
2B | 709 | 459 | 127 | 5.2 | 40 | 3.8 | 88.8 | 1.8 | 35.9 |
2D | 272 | 79 | 23 | 11.4 | 38 | 16.7 | 240.6 | 9.0 | 91.1 |
3A | 389 | 268 | 75 | 4.8 | 22 | 6.7 | 261.7 | 2.3 | 28.6 |
3B | 597 | 421 | 116 | 4.8 | 18 | 3.5 | 40.3 | 2.7 | 101.3 |
3D | 115 | 56 | 15 | 7.4 | 21 | 21.8 | 124.5 | 16.9 | 80.7 |
4A | 326 | 216 | 59 | 5.1 | 36 | 9.5 | 211.3 | 2.2 | 16.3 |
4B | 253 | 141 | 42 | 5.3 | 26 | 4.7 | 39.1 | 6.6 | 162.4 |
4D | 47 | 29 | 8 | 4.1 | 14 | 16.0 | 78.3 | 17.6 | 103.2 |
5A | 544 | 340 | 99 | 5.3 | 38 | 4.6 | 247.9 | 2.1 | 49.8 |
5B | 641 | 365 | 102 | 5.8 | 67 | 4.5 | 110.1 | 1.7 | 19.7 |
5D | 110 | 36 | 11 | 9.3 | 28 | 13.7 | 133.7 | 21.6 | 106.2 |
6A | 433 | 227 | 60 | 7.0 | 55 | 8.2 | 168.9 | 2.5 | 33.5 |
6B | 532 | 300 | 86 | 5.8 | 55 | 5.6 | 202.1 | 2.0 | 21.1 |
6D | 69 | 45 | 13 | 4.8 | 12 | 4.6 | 32.1 | 20.6 | 153.5 |
7A | 509 | 330 | 89 | 5.3 | 34 | 5.2 | 121.4 | 2.3 | 28.8 |
7B | 374 | 270 | 77 | 4.5 | 18 | 6.0 | 89.2 | 2.9 | 37.8 |
7D | 80 | 50 | 17 | 4.2 | 11 | 13.2 | 185.0 | 16.9 | 95.7 |
A | 436.1 | 266.3 | 74 | 5.6 | 38.7 | 6.7 | 176.8 | 2.4 | 44.2 |
B | 575.0 | 326.1 | 92 | 5.9 | 56.0 | 4.8 | 97.9 | 2.7 | 57.1 |
D | 82.1 | 52.7 | 16 | 7.5 | 30.6 | 13.5 | 120.4 | 16.1 | 106.6 |
Overall | 436.9 | 269.5 | 60 | 6.3 | 41.6 | 8.3 | 131.7 | 7.1 | 69.3 |