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Table 1 List of SSR markers linked to repeat-fruiting in cultivated strawberry. “SS” indicates the primer sequences were used individually in sequence-similarity searches against the cultivated strawberry reference genome. “BP” means the primer pairs were used in PCR reactions with 32 breeding parents of known flowering phenotype in the USDA-ARS Beltsville strawberry breeding program

From: Evidence of epistatic suppression of repeat fruiting in cultivated strawberry

SSR name

Use

Primer sequences

Reference

ChFaM011

SS, BP

F: TCCTCTCCTTCTTTCCCTTCA

Zorrilla-Fontanesi et al. 2011 [19]

  

R: CGAGATCTCCCGAGACTGAG

 

EMFvi136

SS

F: GAGCCTGCTACGCTTTTCTATG

Sargent et al. 2003 [20]

  

R: CCTCTGATTCGATGATTTGCT

 

F.v.D3

SS, BP

F: CAGGATCGTTCTTGCTAGTG

Spigler et al. 2010 [21]

  

R: GTTTCTGTTTTCTGGGGTTTGAATA

 

CX661225

SS

F: GCTCTCCTCCTCCGTCTCTT

Spigler et al. 2008 [22]

  

R: GTTTAGCTTCTCCGCTGACG

 

ChFaM148

SS, BP

F: CCCTCCATCAAAGCCAGTT

Zorrilla-Fontanesi et al. 2011 [19]

  

R: CATTAGACCCCGACTTGTCA

 

ChFaM148A

SS

F: GGTTCTGCGCCACATAGCTA

Current study

  

R: CGTATGAGGACGGGGAGGTA

 

ChFaM148B

SS

F: TTGTGCTGCCCTCCATCAAA

Current study

  

R: TGCACTCTTCCATGGCTTCC

 

ChFaM148C

SS, BP

F: GTAGAGATCGATGTATGGTACGT

Current study

  

R: GGATGTCCAATTTGGTTCTGTT

 

ChFaM148D

SS

F: GCGACTGAGGCGTACATACT

Current study

  

R: CGATCAACATCTTGGCAACCC

 

FxaACA02I08C

SS, BP

F: TAGCAGAAGCATTTCACTCCCTCC

Honjo et al. 2016 [23]

  

R: GAATGGCATTTGAGAAATGAGAGCA

 

FANhyb19.1–15

BP

F: TTCTCCATCTTCACATTTCTG

Current study

  

R: TGCTCTCTTTTGCTAAGTACG

 

FANhyb19.1–4

BP

F: GGTCTGGATTTAGGAGAGAAA

Current study

  

R: TCTTCTTCTTTCATCAGAAGC

 

FANhyb19.1–1

BP

F: GCAACTTCTCAACTTTAGCAC

Current study

  

R: CGTGATGAGTTCAAATTAAGG

 

FANhyb19.1–6

BP

F: GGTTTAGGAGAGAAACCAATC

Current study

  

R: GATTACACTCGCACACTTCTC

 

FANhyb19.1–3

BP

F: CGCAGCACCAGTCTTTCATG

Current study

  

R: AACCCTCCTCCTCCTCCTTC

 

FxaAGA01G05C

BP

F: CATTTATCACTGTTTGGCGTTCCC

Honjo et al. 2016 [23]

  

R: CAAAACACCCACGATTATACGGGT

 

FxaAGA02N04C

BP

F: AACAAATTTCAAACCTGAGGAGCG

Honjo et al. 2016 [23]

  

R: AACAGTGTTGCAGTTTCATCCGAA

 

Bx056

BP

F: GGTTACTGGCTCTGCTTGGA

Perrotte et al. 2016 [24]

  

R: CACAATTGAGATCGAGCAACA

 

Bx059

BP

F: GACGTTGACCATGACAGAGC

Perrotte et al. 2016 [24]

  

R: CCCAAAGAAAGCCCAACATA

 

Bx064

BP

F: GGGGAGGTGAAACTGTGAAA

Perrotte et al. 2016 [24]

  

R: TGCAATCTTTGGGAGAGAGAA

 

Bx083

BP

F: ACGTGCCTTAGCGGATCATA

Perrotte et al. 2016 [24]

  

R: CCTAGGTCGGGATCTCAGAA

 

Bx089

BP

F: CACCAAAGATGACTGCTGGA

Perrotte et al. 2016 [24]

  

R: TAAACAGCCCCTGAATCCAA

 

Bx215

BP

F: CAATTTCCCGCCAAAAGTAA

Perrotte et al. 2016 [24]

  

R: GTTGGAGCTTCGAGCAAGTT

 

Bx250

BP

F: GGCATTTCCGCAGATAAAAA

Perrotte et al. 2016 [24]

  

R: AACCTCCTCGTGTTTGATGC