From: RNASeq analysis of giant cane reveals the leaf transcriptome dynamics under long-term salt stress
Cluster ID | Database description | Percent identity | Evalue | log2 fold change |
---|---|---|---|---|
Salt sensory and signaling mechanisms | ||||
14027.182899 | Oryza sativa subsp. japonica Group CBL-interacting protein kinase 1 (CIPK1-SOS2 like), (XM_015766590.1) | 93.33% | 4e-23 | + 39.581 |
14027.54233 | Setaria italica probable cation transporter HKT9 (XM_004967183.2) | 86.32% | 1e-132 | + 18.352 |
14027.155903 | Phragmites australis pcnhx1 mRNA for putative Na+/H+ antiporter (NHX1), (Nt ID: AB211145.1) | 93.40% | 3e-54 | − 21.136 |
14027.181583 | Arabidopsis thaliana Sodium/hydrogen exchanger 2 (NHX2), (Swissprot ID: Q56XP4) | 77.78% | 8e-79 | − 19.411 |
Transcription factors | ||||
14027.152638 | Setaria italica protein TIFY 10B-like (Nr ID: XP_004958300.1) | 84.77% | 2e-131 | − 25.354 |
14027.159286 | Setaria italica trihelix transcription factor GTL1 (Nt ID: XM_012842882.1) | 88.89% | 2e-101 | + 14.963 |
14027.107730 | Panicum miliaceum ABSCISIC ACID-INSENSITIVE 5-like protein 7 (Nr ID: RLM78209.1) | 78.41% | 4e-93 | + 15.107 |
Hormone regulation of salt stress response | ||||
14027.74861 | Triticum urartu Abscisic acid 8′-hydroxylase 1 (Nr ID: EMS68885.1) | 85.54% | 4e-112 | + 47.347 |
14027.144393 | Setaria italica abscisic acid receptor PYL8 (Nt ID: XM_004951229.2). | 77.85% | 4e-80 | + 11.825 |
14027.137264 | Setaria italica abscisic acid receptor PYR1-like (Nr ID: XP_004983564.1) | 85.34% | 1e-104 | + 12.624 |
14027.173535 | Oryza sativa serine/threonine-protein kinase SnRK (SnRK), (Swissprot ID: Q75H77) | 79.69% | 8e-32 | + 14.238 |
14027.235757 | Setaria italica probable protein phosphatase 2C 30 (Nt ID: XM_004984868.2) | 87.80% | 6e-170 | + 27.333 |
14027.228612 | Setaria italica cytochrome P450 734A1 (Nr ID: XP_004962129.1) | 89.90% | 2e-58 | + 16.547 |
14027.99729 | Saccharum arundinaceum 1-aminocyclopropane-1-carboxylate oxidase (ACC oxidase) (Nr ID: ABM74187.1) | 91.46% | 1e-122 | + 15.804 |
14027.265476 | Setaria italica indole-3-pyruvate monooxygenase YUCCA2-like (Nr ID: XP_004967465.1) | 75.33% | 1e-107 | − 40.837 |
ROS scavenging regulatory mechanisms | ||||
14027.179813 | Setaria italica L-ascorbate peroxidase (Nt ID: XM_004984762.3) | 92.70% | 2e-67 | + 17.074 |
14027.36507 | Zea mays glutathione transferase 23 (GST) (Swissprot ID: Q9FQA3) | 86.94% | 1e-142 | + 14.004 |
14027.206288 | Setaria italica NADP-dependent malic enzyme, chloroplastic (Nr ID: XP_004960887.1) | 99.50% | 4e-152 | + 15.008 |
14027.147540 | Setaria italica malate dehydrogenase, mitochondrial (MDH), (Nt ID: XM_004961089.3) | 84.14% | 2e-167 | + 12.416 |
Osmolyte biosynthesis | ||||
14027.146844 | Setaria italica delta-1-pyrroline-5-carboxylate synthase (P5CS), (Nt ID: XM_004961829.3) | 91.92% | 6e-168 | + 40.924 |
14027.163839 | Setaria italica proline dehydrogenase (PDH) (Nt ID: XM_004983669.2) | 89.55% | 3e-114 | − 28.271 |
14027.196396 | Oryza sativa Japonica Group Arginine decarboxylase 1 (ADC) (Nr ID: XP_015643038.1) | 92.73% | 1e-142 | + 46.553 |
Photosynthesis and photorespiration | ||||
14027.153819 | Pisum sativum RuBisCO large subunit-binding protein subunit alpha, chloroplastic (Swissprot ID: P08926) | 74.89% | 4e-110 | − 35.119 |
14027.193818 | Setaria italica peroxisomal (S)-2-hydroxy-acid oxidase (Nt ID: XM_004958250.2) | 92.51% | 5e-156 | + 22.634 |
Biomass digestibility and biofuel production | ||||
14027.274380 | Setaria italica cinnamoyl-CoA reductase 2-like (Nt ID: XP_004956337.1) | 67.31% | 3e-149 | + 39.522 |
14027.178971 | Zea mays caffeoyl CoA 3-O-methyltransferase (Nr ID: AAP33129.1) | 91.10% | 6e-163 | + 13.644 |
14027.116333 | Setaria italica sucrose synthase (Nr ID: XP_004984440.1) | 70.19% | 2e-136 | + 11.104 |
14027.238308 | Setaria italica triacylglycerol lipase SDP1-like (Nr ID: XP_004970049.1) | 78.83% | 6e-112 | + 10.393 |
14027.166055 | Setaria italica diacylglycerol kinase 1 (Nr ID: XP_004983987.1) | 86.87% | 2e-146 | − 15.699 |