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Table 2 Exclusively differentially expressed proteins in IE034 /12–5 × IE034 and 12–5/12–5 × IE034

From: Genetic variation assessment of stacked-trait transgenic maize via conventional breeding

Accession

Name

IE034/SW-1

PVal IE034/SW-1

12–5/ SW-1

PVal 12–5/ SW-1

Z31/Z58

PVal Z31/Z58

SM/Z58

PVal SM/Z58

DQ/Z58

PVal DQ/Z58

BM/Z58

PVal BM/Z58

SM/Z31

PVal SM/Z31

DQ/Z31

PVal DQ/Z31

BM/Z31

PVal BM/Z31

DQ/SM

PVal DQ/SM

BM/SM

PVal BM/SM

BM/DQ

PVal BM/DQ

A0A1D6GQ42_MAIZE

Uncharacterized protein

1.43

0.31

2.31

0.04

0.46

0.08

0.54

0.04

0.44

0.03

0.50

0.03

1.17

0.73

0.93

0.55

1.05

0.54

0.81

0.79

0.90

0.78

1.14

0.99

A0A1D6PUL3_MAIZE

Aconitate hydratase

1.45

0.20

1.71

0.04

1.82

0.01

0.91

0.99

0.91

0.52

1.03

0.51

0.51

0.01

0.48

0.00

0.58

0.00

1.00

0.46

1.13

0.38

1.15

0.89

K7U9U9_MAIZE

Ferredoxin-nitrite reductase

0.86

0.33

0.65

0.01

0.84

0.37

2.36

0.01

1.50

0.40

2.94

0.00

2.73

0.00

1.82

0.09

3.47

0.00

0.62

0.08

1.26

0.22

2.03

0.00

B6SHD8_MAIZE

Non-cyanogenic ß-glucosidase

0.86

0.38

0.60

0.01

0.98

0.57

1.27

0.14

0.49

0.10

0.29

0.02

1.27

0.33

0.48

0.03

0.28

0.01

0.38

0.01

0.23

0.00

0.58

0.40

tr|Q5EUE1|Q5EUE1_MAIZE

Protein disulfide-isomerase

1.31

0.13

2.01

0.00

1.10

0.51

1.16

0.48

1.06

0.64

0.82

0.28

1.05

0.96

0.95

0.84

0.74

0.10

0.91

0.81

0.70

0.09

0.78

0.13

tr|C4JAX7|C4JAX7_MAIZE

UDP-sulfoquinovose synthase

1.25

0.42

1.85

0.00

1.64

0.02

0.63

0.14

0.94

0.68

1.25

0.72

0.38

0.00

0.59

0.01

0.74

0.04

1.56

0.28

1.94

0.07

1.29

0.44

tr|C4J4E4|C4J4E4_MAIZE

Uncharacterized protein

2.75

0.07

3.19

0.01

2.00

0.00

0.94

0.91

0.91

0.96

0.80

0.52

0.47

0.00

0.47

0.00

0.40

0.00

0.98

0.87

0.85

0.60

0.86

0.49

tr|B6SRJ5|B6SRJ5_MAIZE

Bifunctional 3-phosphoadenosine 5-phosphosulfate synthetase 2

0.69

0.00

0.63

0.03

0.93

0.86

1.54

0.24

1.84

0.07

2.01

0.01

1.63

0.19

1.98

0.05

2.11

0.01

1.20

0.47

1.33

0.06

1.11

0.23

tr|B4FNZ1|B4FNZ1_MAIZE

Sucrose-phosphatase 1

1.41

0.35

1.71

0.01

1.12

0.48

1.01

0.78

0.74

0.39

0.30

0.03

0.90

0.66

0.69

0.12

0.28

0.01

0.75

0.26

0.30

0.01

0.39

0.09

tr|K7TFW8|K7TFW8_MAIZE

Uncharacterized protein

0.86

0.42

0.60

0.02

0.44

0.00

0.54

0.01

0.78

0.24

0.63

0.06

1.26

0.15

1.79

0.01

1.46

0.03

1.47

0.11

1.18

0.39

0.79

0.42

tr|A0A1D6EFP8|A0A1D6EFP8_MAIZE

Uncharacterized protein

0.82

0.15

0.58

0.01

0.38

0.01

0.93

0.14

0.77

0.34

0.34

0.00

2.42

0.15

2.03

0.03

0.94

0.19

0.82

0.60

0.36

0.01

0.44

0.00

tr|Q8W0Q2|Q8W0Q2_MAIZE

Putative aldehyde dehydrogenase MIS1

1.13

0.77

1.60

0.03

1.51

0.15

1.16

0.61

1.42

0.17

1.06

0.78

0.76

0.19

0.93

0.72

0.69

0.03

1.24

0.29

0.90

0.40

0.73

0.07

tr|B4F7Z4|B4F7Z4_MAIZE

Uncharacterized protein

1.47

0.26

2.01

0.00

9.04

0.00

0.54

0.96

2.75

0.03

2.36

0.19

0.06

0.00

0.26

0.00

0.23

0.00

5.06

0.00

4.09

0.04

0.91

0.50

tr|K7V8R6|K7V8R6_MAIZE

Peptidyl-prolyl cis-trans isomerase

0.70

0.13

0.31

0.02

0.55

0.31

0.95

0.96

0.95

0.67

0.19

0.10

1.74

0.23

1.72

0.12

0.33

0.09

1.00

0.65

0.20

0.05

0.20

0.02

tr|B6THU9|B6THU9_MAIZE

Peroxidase

0.90

0.44

0.54

0.04

0.95

0.63

1.32

0.24

1.77

0.02

0.86

0.48

1.36

0.12

1.80

0.01

0.86

0.80

1.37

0.17

0.66

0.08

0.49

0.01

tr|C0PNM2|C0PNM2_MAIZE

Uncharacterized protein

0.73

0.61

0.59

0.04

1.03

0.83

0.81

0.90

0.53

0.59

1.94

0.09

0.72

0.74

0.58

0.29

1.84

0.15

0.78

0.67

2.63

0.09

3.44

0.05

tr|A0A1D6N3I1|A0A1D6N3I1_MAIZE

Uncharacterized protein

0.82

0.40

0.53

0.03

4.29

0.00

2.94

0.10

1.47

0.49

3.28

0.03

0.67

0.07

0.35

0.01

0.67

0.14

0.51

0.22

1.03

0.74

1.96

0.17

tr|B6TGK1|B6TGK1_MAIZE

Ribonuclease 2

1.15

0.65

2.44

0.04

2.03

0.06

1.06

0.55

1.01

0.96

1.25

0.36

0.49

0.14

0.47

0.06

0.59

0.23

0.97

0.57

1.15

0.72

1.27

0.33

tr|B4FR21|B4FR21_MAIZE

ATP-dependent RNA helicase dhh1

0.88

0.43

0.64

0.05

0.73

0.11

0.74

0.23

0.51

0.02

0.66

0.05

1.01

0.61

0.68

0.30

0.90

0.60

0.67

0.14

0.88

0.32

1.31

0.59

sp|Q10717|CYSP2_MAIZE

Cysteine proteinase 2

0.50

0.31

2.88

0.02

5.11

0.07

4.33

0.16

2.58

0.26

2.49

0.32

0.88

0.51

0.47

0.04

0.52

0.24

0.56

0.35

0.63

0.60

1.09

0.63

tr|A0A1D6P4W5|A0A1D6P4W5_MAIZE

Uncharacterized protein

0.55

0.07

0.52

0.02

0.88

0.55

0.95

0.55

1.14

0.71

0.84

0.54

1.06

0.75

1.28

0.93

0.95

0.68

1.16

0.82

0.90

0.65

0.74

0.70

tr|B4FU15|B4FU15_MAIZE

Uncharacterized protein

0.79

0.53

0.26

0.04

1.66

0.30

2.17

0.15

3.10

0.04

2.54

0.07

1.32

0.60

1.89

0.14

1.53

0.28

1.43

0.27

1.16

0.54

0.81

0.58

tr|C0P456|C0P456_MAIZE

Uncharacterized protein

0.79

0.42

0.60

0.04

0.73

0.24

0.88

0.34

0.80

0.29

0.69

0.10

1.20

0.80

1.08

0.88

0.92

0.57

0.91

0.91

0.79

0.41

0.87

0.47

sp|Q9FQA3|GST23_MAIZE

Glutathione transferase GST 23

1.18

0.00

1.84

0.00

5.60

0.02

1.61

0.46

1.89

0.19

1.43

0.41

0.27

0.02

0.32

0.03

0.24

0.01

1.17

0.41

0.86

0.19

0.75

0.10

sp|Q43298|CH62_MAIZE

Chaperonin CPN60–2, mitochondrial

1.50

0.00

1.74

0.00

0.92

0.63

0.87

0.03

1.09

0.17

1.02

0.51

0.92

0.04

1.19

0.12

1.10

0.30

1.26

0.00

1.17

0.00

0.94

0.32

tr|B6TXC2|B6TXC2_MAIZE

Isopenicillin N epimerase

1.24

0.04

0.39

0.04

0.21

0.24

0.86

0.70

0.65

0.53

0.66

0.41

3.94

0.29

2.99

0.35

2.96

0.44

0.75

0.76

0.77

0.55

1.02

0.73

tr|A0A1D6DSB5|A0A1D6DSB5_MAIZE

Uncharacterized protein

1.89

0.00

1.38

0.01

0.30

0.00

0.29

0.00

0.41

0.00

0.29

0.00

0.93

0.62

1.38

0.07

0.95

0.66

1.50

0.03

1.02

0.87

0.69

0.02

tr|B6SXW8|B6SXW8_MAIZE

RuBisCO large subunit-binding protein subunit alpha

1.54

0.02

1.45

0.00

0.74

0.16

0.28

0.00

0.62

0.04

0.33

0.00

0.38

0.00

0.85

0.48

0.44

0.00

2.19

0.00

1.18

0.35

0.53

0.00

tr|B6TNR8|B6TNR8_MAIZE

40S ribosomal protein S2

3.10

0.03

0.98

0.44

0.25

0.01

0.46

0.06

0.28

0.01

0.37

0.02

1.89

0.14

1.12

0.98

1.49

0.48

0.57

0.15

0.80

0.38

1.39

0.49

tr|C0PEH3|C0PEH3_MAIZE

Uncharacterized protein

1.51

0.01

1.22

0.23

1.13

0.68

0.89

0.29

0.84

0.40

1.10

0.43

0.78

0.15

0.74

0.22

0.95

0.70

0.94

0.82

1.22

0.08

1.32

0.12

tr|K7U7K6|K7U7K6_MAIZE

Uncharacterized protein

0.54

0.02

0.90

0.50

1.53

0.28

1.43

0.19

1.82

0.13

1.43

0.24

0.93

0.42

1.21

0.25

0.92

0.48

1.32

0.08

1.00

0.83

0.79

0.20

tr|K7UXK5|K7UXK5_MAIZE

Putative alcohol dehydrogenase superfamily protein

1.79

0.03

1.00

0.29

1.38

0.24

0.76

0.11

1.08

0.52

1.21

0.62

0.54

0.01

0.77

0.57

0.86

0.48

1.41

0.03

1.58

0.06

1.12

0.89

tr|J9SKH3|J9SKH3_MAIZE

Divinyl reductase

1.77

0.04

1.28

0.47

0.41

0.00

0.94

0.62

0.74

0.07

1.09

0.66

2.29

0.01

1.77

0.11

2.61

0.00

0.79

0.17

1.14

0.36

1.47

0.04

tr|B6U3A0|B6U3A0_MAIZE

Glycine-rich RNA-binding protein 7

0.51

0.00

0.72

0.16

1.05

0.44

1.39

0.23

1.91

0.01

1.56

0.08

1.29

0.66

1.72

0.09

1.43

0.16

1.37

0.19

1.13

0.32

0.82

0.73

tr|Q38JE7|Q38JE7_MAIZE

Temperature-induced lipocalin-1

1.51

0.03

1.03

0.29

5.60

0.00

1.96

0.08

3.50

0.04

2.13

0.19

0.36

0.01

0.65

0.68

0.39

0.20

1.77

0.22

1.05

0.68

0.57

0.11

tr|B6TBW2|B6TBW2_MAIZE

ATP synthase delta chain

2.01

0.04

1.26

0.36

1.13

0.93

0.64

0.15

0.74

0.09

0.48

0.02

0.58

0.13

0.65

0.08

0.42

0.02

1.14

0.74

0.74

0.30

0.65

0.36

tr|Q6QP36|Q6QP36_MAIZE

26S proteasome regulatory complex ATPase RPT3

0.60

0.04

0.90

0.44

0.63

0.05

0.93

0.77

1.13

0.66

0.97

0.69

1.45

0.08

1.79

0.03

1.51

0.10

1.22

0.47

1.05

0.91

0.86

0.41

tr|B7ZYH5|B7ZYH5_MAIZE

Putative O-glycosyl hydrolase superfamily protein

0.44

0.05

0.58

0.15

0.66

0.65

1.56

0.13

1.39

0.20

1.39

0.54

2.31

0.19

2.05

0.26

2.01

0.53

0.87

0.73

0.86

0.33

0.98

0.51

tr|B6SQG1|B6SQG1_MAIZE

Nudix hydrolase 13

0.44

0.03

0.61

0.34

1.80

0.21

0.72

0.74

1.39

0.78

1.91

0.21

0.46

0.55

0.72

0.73

1.04

0.62

1.74

0.51

2.56

0.43

1.49

0.55

tr|D2DWP1|D2DWP1_MAIZE

3-ketoacyl-CoA synthase

2.96

0.02

0.96

0.74

0.11

0.08

0.08

0.02

0.18

0.00

0.15

0.00

0.83

0.60

2.07

0.41

1.57

0.44

2.56

0.35

2.33

0.36

0.86

0.58

tr|B8A0D8|B8A0D8_MAIZE

Lipoxygenase

0.39

0.04

0.38

0.10

0.34

0.00

0.15

0.00

0.26

0.00

0.08

0.00

0.40

0.19

0.75

0.41

0.19

0.14

1.82

0.73

0.48

0.30

0.23

0.21

tr|A0A1D6ICG6|A0A1D6ICG6_MAIZE

Glycosyltransferase

0.52

0.05

0.96

0.98

2.49

0.48

3.70

0.12

3.13

0.29

1.63

0.89

1.29

0.89

1.20

0.86

0.83

0.35

0.90

0.53

0.50

0.16

0.56

0.24

tr|B4FSV7|B4FSV7_MAIZE

Serine/threonine-protein phosphatase

0.59

0.04

0.82

0.41

0.74

0.23

1.10

0.96

0.91

0.73

0.95

0.59

1.45

0.25

1.22

0.36

1.25

0.47

0.84

0.77

0.86

0.62

1.04

0.84

tr|A0A1D6GU11|A0A1D6GU11_MAIZE

Uncharacterized protein

0.56

0.02

0.76

0.21

1.22

0.32

1.07

0.92

1.22

0.30

0.57

0.02

0.86

0.35

0.99

0.96

0.45

0.02

1.15

0.33

0.52

0.02

0.47

0.02

tr|B6TF18|B6TF18_MAIZE

Membrane steroid-binding protein 1

4.61

0.02

2.54

0.10

0.56

0.13

0.55

0.17

0.65

0.32

0.77

0.38

0.96

0.87

1.14

0.50

1.31

0.42

1.17

0.60

1.38

0.51

1.18

0.88

tr|B6SHW0|B6SHW0_MAIZE

60S ribosomal protein L6

1.94

0.03

0.83

0.03

0.47

0.07

1.28

0.59

0.79

0.21

0.96

0.40

2.56

0.03

1.66

0.04

1.92

0.03

0.62

0.27

0.74

0.64

1.21

0.35

tr|C0PKF9|C0PKF9_MAIZE

Cytokinin riboside 5′-monophosphate phosphoribohydrolase

0.44

0.05

0.65

0.21

0.13

0.08

0.51

0.32

0.13

0.09

1.03

0.76

3.60

0.08

1.19

0.04

7.80

0.08

0.27

0.13

1.92

0.35

6.49

0.18

  1. Note: SW-1 presents 12–5 × IE034
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BMC Plant Biology

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