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Table 2 Exclusively differentially expressed proteins in IE034 /12–5 × IE034 and 12–5/12–5 × IE034

From: Genetic variation assessment of stacked-trait transgenic maize via conventional breeding

Accession Name IE034/SW-1 PVal IE034/SW-1 12–5/ SW-1 PVal 12–5/ SW-1 Z31/Z58 PVal Z31/Z58 SM/Z58 PVal SM/Z58 DQ/Z58 PVal DQ/Z58 BM/Z58 PVal BM/Z58 SM/Z31 PVal SM/Z31 DQ/Z31 PVal DQ/Z31 BM/Z31 PVal BM/Z31 DQ/SM PVal DQ/SM BM/SM PVal BM/SM BM/DQ PVal BM/DQ
A0A1D6GQ42_MAIZE Uncharacterized protein 1.43 0.31 2.31 0.04 0.46 0.08 0.54 0.04 0.44 0.03 0.50 0.03 1.17 0.73 0.93 0.55 1.05 0.54 0.81 0.79 0.90 0.78 1.14 0.99
A0A1D6PUL3_MAIZE Aconitate hydratase 1.45 0.20 1.71 0.04 1.82 0.01 0.91 0.99 0.91 0.52 1.03 0.51 0.51 0.01 0.48 0.00 0.58 0.00 1.00 0.46 1.13 0.38 1.15 0.89
K7U9U9_MAIZE Ferredoxin-nitrite reductase 0.86 0.33 0.65 0.01 0.84 0.37 2.36 0.01 1.50 0.40 2.94 0.00 2.73 0.00 1.82 0.09 3.47 0.00 0.62 0.08 1.26 0.22 2.03 0.00
B6SHD8_MAIZE Non-cyanogenic ß-glucosidase 0.86 0.38 0.60 0.01 0.98 0.57 1.27 0.14 0.49 0.10 0.29 0.02 1.27 0.33 0.48 0.03 0.28 0.01 0.38 0.01 0.23 0.00 0.58 0.40
tr|Q5EUE1|Q5EUE1_MAIZE Protein disulfide-isomerase 1.31 0.13 2.01 0.00 1.10 0.51 1.16 0.48 1.06 0.64 0.82 0.28 1.05 0.96 0.95 0.84 0.74 0.10 0.91 0.81 0.70 0.09 0.78 0.13
tr|C4JAX7|C4JAX7_MAIZE UDP-sulfoquinovose synthase 1.25 0.42 1.85 0.00 1.64 0.02 0.63 0.14 0.94 0.68 1.25 0.72 0.38 0.00 0.59 0.01 0.74 0.04 1.56 0.28 1.94 0.07 1.29 0.44
tr|C4J4E4|C4J4E4_MAIZE Uncharacterized protein 2.75 0.07 3.19 0.01 2.00 0.00 0.94 0.91 0.91 0.96 0.80 0.52 0.47 0.00 0.47 0.00 0.40 0.00 0.98 0.87 0.85 0.60 0.86 0.49
tr|B6SRJ5|B6SRJ5_MAIZE Bifunctional 3-phosphoadenosine 5-phosphosulfate synthetase 2 0.69 0.00 0.63 0.03 0.93 0.86 1.54 0.24 1.84 0.07 2.01 0.01 1.63 0.19 1.98 0.05 2.11 0.01 1.20 0.47 1.33 0.06 1.11 0.23
tr|B4FNZ1|B4FNZ1_MAIZE Sucrose-phosphatase 1 1.41 0.35 1.71 0.01 1.12 0.48 1.01 0.78 0.74 0.39 0.30 0.03 0.90 0.66 0.69 0.12 0.28 0.01 0.75 0.26 0.30 0.01 0.39 0.09
tr|K7TFW8|K7TFW8_MAIZE Uncharacterized protein 0.86 0.42 0.60 0.02 0.44 0.00 0.54 0.01 0.78 0.24 0.63 0.06 1.26 0.15 1.79 0.01 1.46 0.03 1.47 0.11 1.18 0.39 0.79 0.42
tr|A0A1D6EFP8|A0A1D6EFP8_MAIZE Uncharacterized protein 0.82 0.15 0.58 0.01 0.38 0.01 0.93 0.14 0.77 0.34 0.34 0.00 2.42 0.15 2.03 0.03 0.94 0.19 0.82 0.60 0.36 0.01 0.44 0.00
tr|Q8W0Q2|Q8W0Q2_MAIZE Putative aldehyde dehydrogenase MIS1 1.13 0.77 1.60 0.03 1.51 0.15 1.16 0.61 1.42 0.17 1.06 0.78 0.76 0.19 0.93 0.72 0.69 0.03 1.24 0.29 0.90 0.40 0.73 0.07
tr|B4F7Z4|B4F7Z4_MAIZE Uncharacterized protein 1.47 0.26 2.01 0.00 9.04 0.00 0.54 0.96 2.75 0.03 2.36 0.19 0.06 0.00 0.26 0.00 0.23 0.00 5.06 0.00 4.09 0.04 0.91 0.50
tr|K7V8R6|K7V8R6_MAIZE Peptidyl-prolyl cis-trans isomerase 0.70 0.13 0.31 0.02 0.55 0.31 0.95 0.96 0.95 0.67 0.19 0.10 1.74 0.23 1.72 0.12 0.33 0.09 1.00 0.65 0.20 0.05 0.20 0.02
tr|B6THU9|B6THU9_MAIZE Peroxidase 0.90 0.44 0.54 0.04 0.95 0.63 1.32 0.24 1.77 0.02 0.86 0.48 1.36 0.12 1.80 0.01 0.86 0.80 1.37 0.17 0.66 0.08 0.49 0.01
tr|C0PNM2|C0PNM2_MAIZE Uncharacterized protein 0.73 0.61 0.59 0.04 1.03 0.83 0.81 0.90 0.53 0.59 1.94 0.09 0.72 0.74 0.58 0.29 1.84 0.15 0.78 0.67 2.63 0.09 3.44 0.05
tr|A0A1D6N3I1|A0A1D6N3I1_MAIZE Uncharacterized protein 0.82 0.40 0.53 0.03 4.29 0.00 2.94 0.10 1.47 0.49 3.28 0.03 0.67 0.07 0.35 0.01 0.67 0.14 0.51 0.22 1.03 0.74 1.96 0.17
tr|B6TGK1|B6TGK1_MAIZE Ribonuclease 2 1.15 0.65 2.44 0.04 2.03 0.06 1.06 0.55 1.01 0.96 1.25 0.36 0.49 0.14 0.47 0.06 0.59 0.23 0.97 0.57 1.15 0.72 1.27 0.33
tr|B4FR21|B4FR21_MAIZE ATP-dependent RNA helicase dhh1 0.88 0.43 0.64 0.05 0.73 0.11 0.74 0.23 0.51 0.02 0.66 0.05 1.01 0.61 0.68 0.30 0.90 0.60 0.67 0.14 0.88 0.32 1.31 0.59
sp|Q10717|CYSP2_MAIZE Cysteine proteinase 2 0.50 0.31 2.88 0.02 5.11 0.07 4.33 0.16 2.58 0.26 2.49 0.32 0.88 0.51 0.47 0.04 0.52 0.24 0.56 0.35 0.63 0.60 1.09 0.63
tr|A0A1D6P4W5|A0A1D6P4W5_MAIZE Uncharacterized protein 0.55 0.07 0.52 0.02 0.88 0.55 0.95 0.55 1.14 0.71 0.84 0.54 1.06 0.75 1.28 0.93 0.95 0.68 1.16 0.82 0.90 0.65 0.74 0.70
tr|B4FU15|B4FU15_MAIZE Uncharacterized protein 0.79 0.53 0.26 0.04 1.66 0.30 2.17 0.15 3.10 0.04 2.54 0.07 1.32 0.60 1.89 0.14 1.53 0.28 1.43 0.27 1.16 0.54 0.81 0.58
tr|C0P456|C0P456_MAIZE Uncharacterized protein 0.79 0.42 0.60 0.04 0.73 0.24 0.88 0.34 0.80 0.29 0.69 0.10 1.20 0.80 1.08 0.88 0.92 0.57 0.91 0.91 0.79 0.41 0.87 0.47
sp|Q9FQA3|GST23_MAIZE Glutathione transferase GST 23 1.18 0.00 1.84 0.00 5.60 0.02 1.61 0.46 1.89 0.19 1.43 0.41 0.27 0.02 0.32 0.03 0.24 0.01 1.17 0.41 0.86 0.19 0.75 0.10
sp|Q43298|CH62_MAIZE Chaperonin CPN60–2, mitochondrial 1.50 0.00 1.74 0.00 0.92 0.63 0.87 0.03 1.09 0.17 1.02 0.51 0.92 0.04 1.19 0.12 1.10 0.30 1.26 0.00 1.17 0.00 0.94 0.32
tr|B6TXC2|B6TXC2_MAIZE Isopenicillin N epimerase 1.24 0.04 0.39 0.04 0.21 0.24 0.86 0.70 0.65 0.53 0.66 0.41 3.94 0.29 2.99 0.35 2.96 0.44 0.75 0.76 0.77 0.55 1.02 0.73
tr|A0A1D6DSB5|A0A1D6DSB5_MAIZE Uncharacterized protein 1.89 0.00 1.38 0.01 0.30 0.00 0.29 0.00 0.41 0.00 0.29 0.00 0.93 0.62 1.38 0.07 0.95 0.66 1.50 0.03 1.02 0.87 0.69 0.02
tr|B6SXW8|B6SXW8_MAIZE RuBisCO large subunit-binding protein subunit alpha 1.54 0.02 1.45 0.00 0.74 0.16 0.28 0.00 0.62 0.04 0.33 0.00 0.38 0.00 0.85 0.48 0.44 0.00 2.19 0.00 1.18 0.35 0.53 0.00
tr|B6TNR8|B6TNR8_MAIZE 40S ribosomal protein S2 3.10 0.03 0.98 0.44 0.25 0.01 0.46 0.06 0.28 0.01 0.37 0.02 1.89 0.14 1.12 0.98 1.49 0.48 0.57 0.15 0.80 0.38 1.39 0.49
tr|C0PEH3|C0PEH3_MAIZE Uncharacterized protein 1.51 0.01 1.22 0.23 1.13 0.68 0.89 0.29 0.84 0.40 1.10 0.43 0.78 0.15 0.74 0.22 0.95 0.70 0.94 0.82 1.22 0.08 1.32 0.12
tr|K7U7K6|K7U7K6_MAIZE Uncharacterized protein 0.54 0.02 0.90 0.50 1.53 0.28 1.43 0.19 1.82 0.13 1.43 0.24 0.93 0.42 1.21 0.25 0.92 0.48 1.32 0.08 1.00 0.83 0.79 0.20
tr|K7UXK5|K7UXK5_MAIZE Putative alcohol dehydrogenase superfamily protein 1.79 0.03 1.00 0.29 1.38 0.24 0.76 0.11 1.08 0.52 1.21 0.62 0.54 0.01 0.77 0.57 0.86 0.48 1.41 0.03 1.58 0.06 1.12 0.89
tr|J9SKH3|J9SKH3_MAIZE Divinyl reductase 1.77 0.04 1.28 0.47 0.41 0.00 0.94 0.62 0.74 0.07 1.09 0.66 2.29 0.01 1.77 0.11 2.61 0.00 0.79 0.17 1.14 0.36 1.47 0.04
tr|B6U3A0|B6U3A0_MAIZE Glycine-rich RNA-binding protein 7 0.51 0.00 0.72 0.16 1.05 0.44 1.39 0.23 1.91 0.01 1.56 0.08 1.29 0.66 1.72 0.09 1.43 0.16 1.37 0.19 1.13 0.32 0.82 0.73
tr|Q38JE7|Q38JE7_MAIZE Temperature-induced lipocalin-1 1.51 0.03 1.03 0.29 5.60 0.00 1.96 0.08 3.50 0.04 2.13 0.19 0.36 0.01 0.65 0.68 0.39 0.20 1.77 0.22 1.05 0.68 0.57 0.11
tr|B6TBW2|B6TBW2_MAIZE ATP synthase delta chain 2.01 0.04 1.26 0.36 1.13 0.93 0.64 0.15 0.74 0.09 0.48 0.02 0.58 0.13 0.65 0.08 0.42 0.02 1.14 0.74 0.74 0.30 0.65 0.36
tr|Q6QP36|Q6QP36_MAIZE 26S proteasome regulatory complex ATPase RPT3 0.60 0.04 0.90 0.44 0.63 0.05 0.93 0.77 1.13 0.66 0.97 0.69 1.45 0.08 1.79 0.03 1.51 0.10 1.22 0.47 1.05 0.91 0.86 0.41
tr|B7ZYH5|B7ZYH5_MAIZE Putative O-glycosyl hydrolase superfamily protein 0.44 0.05 0.58 0.15 0.66 0.65 1.56 0.13 1.39 0.20 1.39 0.54 2.31 0.19 2.05 0.26 2.01 0.53 0.87 0.73 0.86 0.33 0.98 0.51
tr|B6SQG1|B6SQG1_MAIZE Nudix hydrolase 13 0.44 0.03 0.61 0.34 1.80 0.21 0.72 0.74 1.39 0.78 1.91 0.21 0.46 0.55 0.72 0.73 1.04 0.62 1.74 0.51 2.56 0.43 1.49 0.55
tr|D2DWP1|D2DWP1_MAIZE 3-ketoacyl-CoA synthase 2.96 0.02 0.96 0.74 0.11 0.08 0.08 0.02 0.18 0.00 0.15 0.00 0.83 0.60 2.07 0.41 1.57 0.44 2.56 0.35 2.33 0.36 0.86 0.58
tr|B8A0D8|B8A0D8_MAIZE Lipoxygenase 0.39 0.04 0.38 0.10 0.34 0.00 0.15 0.00 0.26 0.00 0.08 0.00 0.40 0.19 0.75 0.41 0.19 0.14 1.82 0.73 0.48 0.30 0.23 0.21
tr|A0A1D6ICG6|A0A1D6ICG6_MAIZE Glycosyltransferase 0.52 0.05 0.96 0.98 2.49 0.48 3.70 0.12 3.13 0.29 1.63 0.89 1.29 0.89 1.20 0.86 0.83 0.35 0.90 0.53 0.50 0.16 0.56 0.24
tr|B4FSV7|B4FSV7_MAIZE Serine/threonine-protein phosphatase 0.59 0.04 0.82 0.41 0.74 0.23 1.10 0.96 0.91 0.73 0.95 0.59 1.45 0.25 1.22 0.36 1.25 0.47 0.84 0.77 0.86 0.62 1.04 0.84
tr|A0A1D6GU11|A0A1D6GU11_MAIZE Uncharacterized protein 0.56 0.02 0.76 0.21 1.22 0.32 1.07 0.92 1.22 0.30 0.57 0.02 0.86 0.35 0.99 0.96 0.45 0.02 1.15 0.33 0.52 0.02 0.47 0.02
tr|B6TF18|B6TF18_MAIZE Membrane steroid-binding protein 1 4.61 0.02 2.54 0.10 0.56 0.13 0.55 0.17 0.65 0.32 0.77 0.38 0.96 0.87 1.14 0.50 1.31 0.42 1.17 0.60 1.38 0.51 1.18 0.88
tr|B6SHW0|B6SHW0_MAIZE 60S ribosomal protein L6 1.94 0.03 0.83 0.03 0.47 0.07 1.28 0.59 0.79 0.21 0.96 0.40 2.56 0.03 1.66 0.04 1.92 0.03 0.62 0.27 0.74 0.64 1.21 0.35
tr|C0PKF9|C0PKF9_MAIZE Cytokinin riboside 5′-monophosphate phosphoribohydrolase 0.44 0.05 0.65 0.21 0.13 0.08 0.51 0.32 0.13 0.09 1.03 0.76 3.60 0.08 1.19 0.04 7.80 0.08 0.27 0.13 1.92 0.35 6.49 0.18
  1. Note: SW-1 presents 12–5 × IE034