Skip to main content

Table 1 List of putative euAP2 genes and their protein features in B.napus

From: Genome-wide exploration and characterization of miR172/euAP2 genes in Brassica napus L. for likely role in flower organ development

Gene id Gene name Gene id Gene name Chromosome Target_start Target_end Amino acid length (aa) pI MW Subcellular location Conserved AP2 motif number
AT4G36920 AthAP2 BnaA01g34730D BnaAP2–1 A01_random 581 601 233 8.89 25769.56 Nucleus 1
BnaA03g53830D BnaAP2–2 A03 1344 1364 432 6.77 47937.77 Nucleus 2
BnaC01g01710D BnaAP2–3 C01 400 6.02 44092.70 Nucleus 2
BnaCnng39690D BnaAP2–4 Cnn_random 1342 1362 431 6.41 47685.41 Nucleus 2
BnaCnng71740D BnaAP2–5 Cnn_random 578 598 227 7.87 25015.64 Nucleus 1
AT3G54990 AthSMZ BnaA09g54740D BnaSMZ-1 A09_random 953 973 343 9.42 38181.8 Cytoplasm 1
BnaC06g15540D BnaSMZ-2 C06 911 931 328 9.15 36790.23 Cytoplasm 1
BnaC08g25840D BnaSMZ-3 C08 956 976 344 9.39 38334.04 Cytoplasm 1
AT2G39250 AthSNZ BnaC02g15640D BnaSNZ C02 128 6.27 14495.41 Cytoplasm 1
AT2G28550 AthTOE1 BnaA03g22100D BnaTOE1–1 A03 1460 1480 436 6.51 47782.51 Cytoplasm. Nucleus 2
BnaA07g13990D BnaTOE1–2 A07 1512 1532 454 6.48 49570.20 Nucleus 2
BnaC03g26480D BnaTOE1–3 C03 1384 1404 417 6.61 45569.96 Cytoplasm. Nucleus 1
BnaC04g15640D BnaTOE1–4 C04 1496 1516 454 6.48 49308.84 Nucleus 2
BnaC09g13430D BnaTOE1–5 C09 694 714 103 8.09 11002.98 Nucleus 1
AT5G60120 AthTOE2 BnaA02g06490D BnaTOE2–1 A02 1184 1204 431 8.56 47492.05 Cytoplasm. Nucleus 1
BnaA10g12950D BnaTOE2–2 A10 1412 1432 452 7.74 49305.81 Cytoplasm. Nucleus 1
BnaC09g35430D BnaTOE2–3 C09 1187 1207 454 7.74 49632.26 Cytoplasm. Nucleus 1
AT5G67180 AthTOE3 BnaA07g12050D BnaTOE3–1 A07 1315 1335 360 8.91 40692.38 Nucleus 2
BnaC07g16190D BnaTOE3–2 C07 1272 1292 361 9.11 40835.46 Cytoplasm. Nucleus 2