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Table 2 Selected DEGs involved in cell wall metabolism pathway

From: Transcriptomic analysis reveals key factors in fruit ripening and rubbery texture caused by 1-MCP in papaya

Gene ID log2 FC Blast annotation Blasted species
DAT1/0 DAT6/0  
evm.TU.contig_39949 −4.26 −3.48 Tubulin beta-6 chain MXC9.21 Arabidopsis thaliana
evm.TU.supercontig_3.77 −4.17 −4.16 Pectinesterase 34 (PE34) Arabidopsis thaliana
evm.TU.supercontig_40.35 −3.73 −1.70 Probable glycosyltransferase Arabidopsis thaliana
evm.TU.supercontig_69.40 −3.67 −1.37 Probable polygalacturonase non-catalytic subunit JP650 (PG) Arabidopsis thaliana
evm.TU.supercontig_50.101 −3.33 0.51 Callose synthase 7 Arabidopsis thaliana
evm.TU.supercontig_5.99 −3.23 1.05 Probable 3-deoxy-D-manno-octulosonic acid transferase (KDO transferase) Arabidopsis thaliana
evm.TU.supercontig_5185.1 −3.12 −4.05 Cellulose synthase A catalytic subunit 6 [UDP-forming] Arabidopsis thaliana
evm.TU.supercontig_145.14 −3.06 −3.89 Pectinesterase 36 (Precursor) (PE36) Arabidopsis thaliana
evm.TU.supercontig_69.14 −3.02 −4.14 Probable xyloglucan endotransglucosylase/hydrolase protein 33 (XTH33) Arabidopsis thaliana
evm.TU.supercontig_233.22 −2.91 −0.53 Probable xyloglucan endotransglucosylase/hydrolase protein 25 (XTH25) Arabidopsis thaliana
evm.TU.supercontig_452.5 −2.84 −1.42 Callose synthase 3 Arabidopsis thaliana
evm.TU.supercontig_714.1 −2.70 −0.99 Putative callose synthase 8 Arabidopsis thaliana
evm.TU.supercontig_25.167 −2.69 −0.24 Callose synthase 3 Arabidopsis thaliana
evm.TU.supercontig_260.6 −2.59 0.25 Expansin-A4 (EXP-A4) Arabidopsis thaliana
evm.TU.supercontig_341.1 −2.52 −2.18 Galactoside 2-alpha-L-fucosyltransferase (FUT2) Pisum sativum
evm.TU.supercontig_157.42 −2.33 −1.54 Xyloglucan galactosyltransferase (MUR3) Arabidopsis thaliana
evm.TU.supercontig_49.102 −2.22 −2.53 Probable cellulose synthase A catalytic subunit 9 (CS) Arabidopsis thaliana
evm.TU.supercontig_180.28 −2.09 −1.09 Probable polygalacturonase (PG) Vitis vinifera (Grape)
evm.TU.supercontig_217.19 −2.08 −0.20 Probable sucrose-phosphate synthase 1(SPS1) Citrus unshiu (Satsuma mandarin)
evm.TU.supercontig_79.25 2.03 2.04 UDP-glucose 4-epimerase (GAE) Cyamopsis tetragonoloba
evm.TU.supercontig_1145.1 2.28 0.47 Cellulose synthase-like protein D3 (CS-D3) Arabidopsis thaliana
evm.TU.supercontig_1.107 2.29 0.05 UDP-glucose 6-dehydrogenase 2 (UGDH2) Arabidopsis thaliana
evm.TU.supercontig_92.75 2.35 0.78 Tubulin beta-3 chain Gossypium hirsutum
evm.TU.supercontig_64.43 2.51 0.62 Probable galacturonosyltransferase-like 1 (GalAT-like 1) Arabidopsis thaliana
evm.TU.supercontig_198.12 2.51 −1.48 Probable xyloglucan endotransglucosylase/hydrolase protein 8 (XTH8) Arabidopsis thaliana
evm.TU.supercontig_37.20 2.52 4.83 Beta-galactosidase 10 (β-GAL10) Arabidopsis thaliana
evm.TU.supercontig_1.388 2.56 4.10 UDP-glucuronic acid decarboxylase 6 (UGDL6) Arabidopsis thaliana
evm.TU.supercontig_285.6 2.63 1.52 UDP-arabinose 4-epimerase 1 Arabidopsis thaliana
evm.TU.supercontig_1.419 3.09 1.00 Expansin-A4 (EXP-A4) Arabidopsis thaliana
evm.TU.supercontig_808.2 3.12 −0.12 Glucuronoxylan 4-O-methyltransferase 1 Arabidopsis thaliana
evm.TU.supercontig_146.68 3.13 4.74 Galactinol synthase 2 (GS2) Arabidopsis thaliana
evm.TU.supercontig_208.1 3.47 1.81 Probable xyloglucan endotransglucosylase/hydrolase protein 30 (XTH30) Arabidopsis thaliana
evm.TU.supercontig_1.407 3.51 1.20 Glucan endo-1,3-beta-glucosidase Triticum aestivum (Wheat)
evm.TU.supercontig_18.107 3.84 2.61 UDP-glucuronate 4-epimerase 3 (GAE3) Arabidopsis thaliana
evm.TU.supercontig_151.19 4.09 2.85 Pectinesterase 40 (PE40) Arabidopsis thaliana
evm.TU.supercontig_6.101 4.42 4.45 Microtubule-associated protein RP/EB family member 1C (MAPRE1C) Arabidopsis thaliana
evm.TU.supercontig_92.36 4.52 6.16 Polygalacturonase (PME) Actinidia deliciosa
evm.TU.supercontig_189.36 4.79 5.85 Beta-glucosidase 32 (β-GAL32) Arabidopsis thaliana
evm.TU.supercontig_57.23 5.35 Chitinase 10 (Precursor) Oryza sativa subsp. japonica
evm.TU.supercontig_2.231 5.45 6.57 Endoglucanase 8 (Precursor) (Egase8) Arabidopsis thaliana
evm.TU.supercontig_46.178 6.52 Cellulose synthase A catalytic subunit 7 (CS-A7) Arabidopsis thaliana
evm.TU.supercontig_46.179 6.77 1.17 Cellulose synthase A catalytic subunit 7 (CS-A7) Arabidopsis thaliana
evm.TU.supercontig_250.6 8.28 7.61 Polygalacturonase (PG) Prunus persica (Peach)
evm.TU.supercontig_64.7 8.42 Polygalacturonase (PG) Prunus persica (Peach)
evm.TU.supercontig_106.45 11.59 10.04 Endoxylanase (EXY1) Carica papaya
evm.TU.supercontig_1540.1 5.43 Pectinesterase 12 (PE12) Arabidopsis thaliana
evm.TU.supercontig_33.138 3.56 Pectinesterase 46 (PE46) Arabidopsis thaliana
evm.TU.supercontig_50.160 5.14 Sucrose synthase 2 (SS2) Arabidopsis thaliana
evm.TU.supercontig_8.136 5.92 Putative xyloglucan endotransglucosylase/hydrolase protein 1 (XTH1) Arabidopsis thaliana
evm.TU.supercontig_81.134 2.78 Expansin-A4 (EXP-A4) Arabidopsis thaliana