Table 2 Selected DEGs involved in cell wall metabolism pathway

evm.TU.contig_39949

−4.26

−3.48

Tubulin beta-6 chain MXC9.21

Arabidopsis thaliana

evm.TU.supercontig_3.77

−4.17

−4.16

Pectinesterase 34 (PE34)

Arabidopsis thaliana

evm.TU.supercontig_40.35

−3.73

−1.70

Probable glycosyltransferase

Arabidopsis thaliana

evm.TU.supercontig_69.40

−3.67

−1.37

Probable polygalacturonase non-catalytic subunit JP650 (PG)

Arabidopsis thaliana

evm.TU.supercontig_50.101

−3.33

0.51

Callose synthase 7

Arabidopsis thaliana

evm.TU.supercontig_5.99

−3.23

1.05

Probable 3-deoxy-D-manno-octulosonic acid transferase (KDO transferase)

Arabidopsis thaliana

evm.TU.supercontig_5185.1

−3.12

−4.05

Cellulose synthase A catalytic subunit 6 [UDP-forming]

Arabidopsis thaliana

evm.TU.supercontig_145.14

−3.06

−3.89

Pectinesterase 36 (Precursor) (PE36)

Arabidopsis thaliana

evm.TU.supercontig_69.14

−3.02

−4.14

Probable xyloglucan endotransglucosylase/hydrolase protein 33 (XTH33)

Arabidopsis thaliana

evm.TU.supercontig_233.22

−2.91

−0.53

Probable xyloglucan endotransglucosylase/hydrolase protein 25 (XTH25)

Arabidopsis thaliana

evm.TU.supercontig_452.5

−2.84

−1.42

Callose synthase 3

Arabidopsis thaliana

evm.TU.supercontig_714.1

−2.70

−0.99

Putative callose synthase 8

Arabidopsis thaliana

evm.TU.supercontig_25.167

−2.69

−0.24

Callose synthase 3

Arabidopsis thaliana

evm.TU.supercontig_260.6

−2.59

0.25

Expansin-A4 (EXP-A4)

Arabidopsis thaliana

evm.TU.supercontig_341.1

−2.52

−2.18

Galactoside 2-alpha-L-fucosyltransferase (FUT2)

Pisum sativum

evm.TU.supercontig_157.42

−2.33

−1.54

Xyloglucan galactosyltransferase (MUR3)

Arabidopsis thaliana

evm.TU.supercontig_49.102

−2.22

−2.53

Probable cellulose synthase A catalytic subunit 9 (CS)

Arabidopsis thaliana

evm.TU.supercontig_180.28

−2.09

−1.09

Probable polygalacturonase (PG)

Vitis vinifera (Grape)

evm.TU.supercontig_217.19

−2.08

−0.20

Probable sucrose-phosphate synthase 1(SPS1)

Citrus unshiu (Satsuma mandarin)

evm.TU.supercontig_79.25

2.03

2.04

UDP-glucose 4-epimerase (GAE)

Cyamopsis tetragonoloba

evm.TU.supercontig_1145.1

2.28

0.47

Cellulose synthase-like protein D3 (CS-D3)

Arabidopsis thaliana

evm.TU.supercontig_1.107

2.29

0.05

UDP-glucose 6-dehydrogenase 2 (UGDH2)

Arabidopsis thaliana

evm.TU.supercontig_92.75

2.35

0.78

Tubulin beta-3 chain

Gossypium hirsutum

evm.TU.supercontig_64.43

2.51

0.62

Probable galacturonosyltransferase-like 1 (GalAT-like 1)

Arabidopsis thaliana

evm.TU.supercontig_198.12

2.51

−1.48

Probable xyloglucan endotransglucosylase/hydrolase protein 8 (XTH8)

Arabidopsis thaliana

evm.TU.supercontig_37.20

2.52

4.83

Beta-galactosidase 10 (β-GAL10)

Arabidopsis thaliana

evm.TU.supercontig_1.388

2.56

4.10

UDP-glucuronic acid decarboxylase 6 (UGDL6)

Arabidopsis thaliana

evm.TU.supercontig_285.6

2.63

1.52

UDP-arabinose 4-epimerase 1

Arabidopsis thaliana

evm.TU.supercontig_1.419

3.09

1.00

Expansin-A4 (EXP-A4)

Arabidopsis thaliana

evm.TU.supercontig_808.2

3.12

−0.12

Glucuronoxylan 4-O-methyltransferase 1

Arabidopsis thaliana

evm.TU.supercontig_146.68

3.13

4.74

Galactinol synthase 2 (GS2)

Arabidopsis thaliana

evm.TU.supercontig_208.1

3.47

1.81

Probable xyloglucan endotransglucosylase/hydrolase protein 30 (XTH30)

Arabidopsis thaliana

evm.TU.supercontig_1.407

3.51

1.20

Glucan endo-1,3-beta-glucosidase

Triticum aestivum (Wheat)

evm.TU.supercontig_18.107

3.84

2.61

UDP-glucuronate 4-epimerase 3 (GAE3)

Arabidopsis thaliana

evm.TU.supercontig_151.19

4.09

2.85

Pectinesterase 40 (PE40)

Arabidopsis thaliana

evm.TU.supercontig_6.101

4.42

4.45

Microtubule-associated protein RP/EB family member 1C (MAPRE1C)

Arabidopsis thaliana

evm.TU.supercontig_92.36

4.52

6.16

Polygalacturonase (PME)

Actinidia deliciosa

evm.TU.supercontig_189.36

4.79

5.85

Beta-glucosidase 32 (β-GAL32)

Arabidopsis thaliana

evm.TU.supercontig_57.23

5.35

–

Chitinase 10 (Precursor)

Oryza sativa subsp. japonica

evm.TU.supercontig_2.231

5.45

6.57

Endoglucanase 8 (Precursor) (Egase8)

Arabidopsis thaliana

evm.TU.supercontig_46.178

6.52

–

Cellulose synthase A catalytic subunit 7 (CS-A7)

Arabidopsis thaliana

evm.TU.supercontig_46.179

6.77

1.17

Cellulose synthase A catalytic subunit 7 (CS-A7)

Arabidopsis thaliana

evm.TU.supercontig_250.6

8.28

7.61

Polygalacturonase (PG)

Prunus persica (Peach)

evm.TU.supercontig_64.7

8.42

–

Polygalacturonase (PG)

Prunus persica (Peach)

evm.TU.supercontig_106.45

11.59

10.04

Endoxylanase (EXY1)

Carica papaya

evm.TU.supercontig_1540.1

–

5.43

Pectinesterase 12 (PE12)

Arabidopsis thaliana

evm.TU.supercontig_33.138

–

3.56

Pectinesterase 46 (PE46)

Arabidopsis thaliana

evm.TU.supercontig_50.160

–

5.14

Sucrose synthase 2 (SS2)

Arabidopsis thaliana

evm.TU.supercontig_8.136

–

5.92

Putative xyloglucan endotransglucosylase/hydrolase protein 1 (XTH1)

Arabidopsis thaliana

evm.TU.supercontig_81.134

–

2.78

Expansin-A4 (EXP-A4)

Arabidopsis thaliana