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Fig. 6 | BMC Plant Biology

Fig. 6

From: Effect of wet storage conditions on potato tuber transcriptome, phytohormones and growth

Fig. 6

Effect of ethylene inhibitor and methyl jasmonate treatment on gene expression in wet potato tubers. Incubation of potato tubers in wet conditions in the presence of ethylene inhibitor 1-methylcyclopropane (1-MCP) or methyl jasmonate (MeJA) reduced the effect of wet conditions in qRT-PCR analysis. The chosen genes representing different functions were classified into four groups: a Defense responses: CCR4 associated factor 1-like (CAF1), WRKY-type DNA binding protein (WRKY), spermidine synthase 1-like (SPDS), major latex-like protein-like 34 (MLP34), patatin (PAT), defensin protein precursor (PDF); b Hormone biosynthesis and signaling: Nt-iaa4.5 deduced protein (AUX/IAA), lipoxygenase 1 (LOX1), lipoxygenase 3 (LOX3), protein TIFY 10A-like (JAZ1), protein phosphatase 2C 63 (PP2C), harpin inducing protein-like (HIN1); c Sugar and amino acid metabolism: Trehalose-6P synthase (TPS), SNF1-related protein kinase regulatory subunit gamma-1 (KING1), glucose-6-P translocator 2 (GPT2), glycerol kinase (GK), bidirectional sugar transporter (Sweet), alanine aminotransferase 2 (AlaAT2); d Cell wall and secondary metabolism: Expansin (EXP), early nodulin 93 (ENOD), 4-coumarate CoA ligase-like 2 (4CL), HMG-CoA reductase (HMG). The graph demonstrates means of log2 fold change from three independent experiments, error bars show standard error of mean and t-test results are shown (*p < 0.05, **p < 0.01)

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