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Table 6 Statistics of KEGG enrichment top 16

From: Identification of miRNAs and their target genes in Larix olgensis and verified of differential expression miRNAs

Kegg_pathway ko_ID enrichment_factor Cluter_frequency Genome_frequency Regluate P-value Corrected_P-value Target ID
Ribosome ko03010 0.32 1 out of 8 (12.5%) 1 out of 25 (4%) up (1) 0.32 1 c65500.graph_c0
Fatty acid biosynthesis ko00061 0.32 1 out of 8 (12.5%) 1 out of 25 (4%) down (2) 0.32 1 c82138.graph_c0
N-Glycan biosynthesis ko00510 0.32 1 out of 8 (12.5%) 1 out of 25 (4%) up (2) 0.32 1 c75325.graph_c0
Plant hormone signal transduction ko04075 0.32 1 out of 8 (12.5%) 1 out of 25 (4%) down (1) 0.32 1 c80883.graph_c0
Propanoate metabolism ko00640 0.32 1 out of 8 (12.5%) 1 out of 25 (4%) down (1) 0.32 1 c82138.graph_c0
Endocytosis ko04144 0.32 1 out of 8 (12.5%) 1 out of 25 (4%) up (1) 0.32 1 c79817.graph_c0
Butanoate metabolism ko00650 0.32 1 out of 8 (12.5%) 1 out of 25 (4%) up (2) 0.32 1 c83046.graph_c0
Valine, leucine and isoleucine biosynthesis ko00290 0.32 1 out of 8 (12.5%) 1 out of 25 (4%) up (3) 0.32 1 c83046.graph_c0
Ribosome biogenesis in eukaryotes ko03008 0.32 1 out of 8 (12.5%) 1 out of 25 (4%) down (1) 0.32 1 c40049.graph_c0
Plant-pathogen interaction ko04626 0.32 1 out of 8 (12.5%) 1 out of 25 (4%) down (1) 0.32 1 c71353.graph_c0
Pyruvate metabolism ko00620 0.32 1 out of 8 (12.5%) 1 out of 25 (4%) down (1) 0.32 1 c82138.graph_c0
C5-Branched dibasic acid metabolism ko00660 0.32 1 out of 8 (12.5%) 1 out of 25 (4%) up (1) 0.32 1 c83046.graph_c0
Protein processing in endoplasmic reticulum ko04141 0.64 1 out of 8 (12.5%) 2 out of 25 (8%) up (2) 0.546666667 1 c79817.graph_c0
Pantothenate and CoA biosynthesis ko00770 0.64 1 out of 8 (12.5%) 2 out of 25 (8%) up (1) 0.546666667 1 c83046.graph_c0
Spliceosome ko03040 0.64 1 out of 8 (12.5%) 2 out of 25 (8%) up (1) 0.546666667 1 c79817.graph_c0
RNA transport ko03013 0.96 1 out of 8 (12.5%) 3 out of 25 (12%) down (4) 0.704347826 1 c40049.graph_c0
  1. Notes:ko_ID KEGG pathway ID, Cluter_frequency The ratio that sample-to-sample miRNAs predicted to target genes annotated to the pathway target genes number accounted for sample-to-sample predicted target genes of miRNAs annotation to KEGG. Genome_frequency: the ratio that target genes number of all miRNAs predicted were annotated to the target genes number of the pathway, which accounted for the target genes of all miRNAs annotated to the pathway; P-value: Significance of enrichment, the smaller the P-value, the higher the enrichment