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Table 6 Statistics of KEGG enrichment top 16

From: Identification of miRNAs and their target genes in Larix olgensis and verified of differential expression miRNAs

Kegg_pathway

ko_ID

enrichment_factor

Cluter_frequency

Genome_frequency

Regluate

P-value

Corrected_P-value

Target ID

Ribosome

ko03010

0.32

1 out of 8 (12.5%)

1 out of 25 (4%)

up (1)

0.32

1

c65500.graph_c0

Fatty acid biosynthesis

ko00061

0.32

1 out of 8 (12.5%)

1 out of 25 (4%)

down (2)

0.32

1

c82138.graph_c0

N-Glycan biosynthesis

ko00510

0.32

1 out of 8 (12.5%)

1 out of 25 (4%)

up (2)

0.32

1

c75325.graph_c0

Plant hormone signal transduction

ko04075

0.32

1 out of 8 (12.5%)

1 out of 25 (4%)

down (1)

0.32

1

c80883.graph_c0

Propanoate metabolism

ko00640

0.32

1 out of 8 (12.5%)

1 out of 25 (4%)

down (1)

0.32

1

c82138.graph_c0

Endocytosis

ko04144

0.32

1 out of 8 (12.5%)

1 out of 25 (4%)

up (1)

0.32

1

c79817.graph_c0

Butanoate metabolism

ko00650

0.32

1 out of 8 (12.5%)

1 out of 25 (4%)

up (2)

0.32

1

c83046.graph_c0

Valine, leucine and isoleucine biosynthesis

ko00290

0.32

1 out of 8 (12.5%)

1 out of 25 (4%)

up (3)

0.32

1

c83046.graph_c0

Ribosome biogenesis in eukaryotes

ko03008

0.32

1 out of 8 (12.5%)

1 out of 25 (4%)

down (1)

0.32

1

c40049.graph_c0

Plant-pathogen interaction

ko04626

0.32

1 out of 8 (12.5%)

1 out of 25 (4%)

down (1)

0.32

1

c71353.graph_c0

Pyruvate metabolism

ko00620

0.32

1 out of 8 (12.5%)

1 out of 25 (4%)

down (1)

0.32

1

c82138.graph_c0

C5-Branched dibasic acid metabolism

ko00660

0.32

1 out of 8 (12.5%)

1 out of 25 (4%)

up (1)

0.32

1

c83046.graph_c0

Protein processing in endoplasmic reticulum

ko04141

0.64

1 out of 8 (12.5%)

2 out of 25 (8%)

up (2)

0.546666667

1

c79817.graph_c0

Pantothenate and CoA biosynthesis

ko00770

0.64

1 out of 8 (12.5%)

2 out of 25 (8%)

up (1)

0.546666667

1

c83046.graph_c0

Spliceosome

ko03040

0.64

1 out of 8 (12.5%)

2 out of 25 (8%)

up (1)

0.546666667

1

c79817.graph_c0

RNA transport

ko03013

0.96

1 out of 8 (12.5%)

3 out of 25 (12%)

down (4)

0.704347826

1

c40049.graph_c0

  1. Notes:ko_ID KEGG pathway ID, Cluter_frequency The ratio that sample-to-sample miRNAs predicted to target genes annotated to the pathway target genes number accounted for sample-to-sample predicted target genes of miRNAs annotation to KEGG. Genome_frequency: the ratio that target genes number of all miRNAs predicted were annotated to the target genes number of the pathway, which accounted for the target genes of all miRNAs annotated to the pathway; P-value: Significance of enrichment, the smaller the P-value, the higher the enrichment