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Table 1 The list of the putative CYP genes identified in G. hirsutum

From: Genome-wide identification of cyclophilin genes in Gossypium hirsutum and functional characterization of a CYP with antifungal activity against Verticillium dahliae

Gene Name Gene ID (NAU1) CDS (bp) Protein (aa) MW (kDa) pI Subcellular location Gene ID (JGI/NAU2) Identity (%) (JGI/NAU2)
GhCYP-1 Gh_A01G0027 675 224 24.5 7.3 Cyto Gohir.A01G003000/GH_A01G0029 100/100
GhCYP-2 Gh_A01G0031 516 171 18.2 7.9 Cyto Gohir.A01G003400/GH_A01G0034 99/99
GhCYP-3 Gh_A01G1361 522 173 18.2 8.5 Cyto Gohir.A01G164200/GH_A01G1763 100/100
GhCYP-4 Gh_A01G1747 495 164 18.0 8.2 Cyto/Mito/Chlo Gohir.A01G204600/GH_A01G2217 100/100
GhCYP-5 Gh_A02G0528 708 235 26.5 9.8 Mito Gohir.A02G054200/GH_A02G0571 100/100
GhCYP-6 Gh_A02G1526 1116 371 41.9 6.6 Cyto No found/GH_A02G1850 -/100
GhCYP-7 Gh_A03G0499 966 321 35.0 8.7 Chlo Gohir.A03G057400/GH_A03G0699 100/100
GhCYP-8 Gh_A03G0865 648 216 24.5 6.1 Chlo Gohir.A03G099700/GH_A03G1148 100/100
GhCYP-9 Gh_A03G1688 1221 406 45.9 8.8 Cyto Gohir.A03G191300/GH_A03G2153 100/100
GhCYP-10 Gh_A04G1046 522 173 18.5 10.1 Cyto No found/GH_A04G1474 -/100
GhCYP-11 Gh_A04G1047 522 173 18.3 8.2 Cyto No found/GH_A04G1475 -/100
GhCYP-12 Gh_A05G0642 1026 341 37.6 8.6 Cyto Gohir.A05G078500/GH_A05G0800 74/73
GhCYP-13 Gh_A05G3461 567 188 20.4 8.2 Cyto No found/GH_A05G4196 -/100
GhCYP-14 Gh_A05G4019 1836 611 70.5 6.2 Nucl Gohir.A05G003300/GH_A05G0027 100/100
GhCYP-15 Gh_A06G0418 870 289 31.9 6.9 Extra Gohir.A06G049800/GH_A06G0538 100/100
GhCYP-16 Gh_A06G0767 1494 497 56.1 8.7 Nucl Gohir.A06G085500/GH_A06G0934 100/100
GhCYP-17 Gh_A07G0324 2373 790 89.3 12.0 Nucl Gohir.A07G038000/GH_A07G0439 100/99
GhCYP-18 Gh_A07G0325 2388 795 89.9 11.6 Nucl Gohir.A07G038100/GH_A07G0440 93/93
GhCYP-19 Gh_A07G0986 1866 621 70.0 7.0 Cyto Gohir.A07G108500/GH_A07G1190 100/100
GhCYP-20 Gh_A07G2012 1359 452 50.0 4.9 Chlo Gohir.A07G219400/GH_A07G2484 100/99
GhCYP-21 Gh_A08G0354 711 236 26.9 9.2 Mito Gohir.A08G040200/GH_A08G0443 100/100
GhCYP-22 Gh_A08G1077 855 284 31.0 8.2 Extra/PM/Chlo Gohir.A08G122000/GH_A08G1462 88/97
GhCYP-23 Gh_A08G1194 483 160 17.4 8.5 Cyto Gohir.A08G133100/GH_A08G1597 100/100
GhCYP-24 Gh_A08G1470 1032 343 38.0 5.4 Extra Gohir.A08G162600/GH_A08G1886 100/100
GhCYP-25 Gh_A08G1670 1986 661 72.8 10.7 Nucl Gohir.A08G187500/GH_A08G2136 94/94
GhCYP-26 Gh_A09G0254 1308 435 47.9 4.6 Cyto Gohir.A09G026100/GH_A09G0300 100/100
GhCYP-27 Gh_A09G0853 624 207 22.2 9.4 Cyto/Mito Gohir.A09G090200/GH_A09G1082 96/96
GhCYP-28 Gh_A09G1765 1032 343 37.9 6.0 Extra Gohir.A09G197200/GH_A09G2134 100/100
GhCYP-29 Gh_A10G0832 1089 362 40.3 6.7 Cyto Gohir.A10G092800/GH_A10G0930 97/96
GhCYP-30 Gh_A10G1682 576 191 20.7 8.2 Cyto Gohir.A10G187900/GH_A10G2053 100/100
GhCYP-31 Gh_A10G1687 609 202 22.1 8.6 Cyto Gohir.A10G188300/GH_A10G2060 90/89
GhCYP-32 Gh_A10G2121 666 221 23.9 9.4 Cyto Gohir.A10G236300/GH_A10G2615 100/100
GhCYP-33 Gh_A11G0678 996 331 37.2 5.3 Extra Gohir.A11G074800/GH_A11G0773 82/82
GhCYP-34 Gh_A11G0987 705 234 26.8 8.9 Mito/Nucl Gohir.A11G108500/GH_A11G1131 100/100
GhCYP-35 Gh_A12G0709 1791 596 65.3 8.2 Mito/Nucl Gohir.A12G077300/GH_A12G0891 100/100
GhCYP-36 Gh_A12G2539 765 254 28.6 5.9 Cyto Gohir.A12G082500/GH_A12G0712 100/100
GhCYP-37 Gh_A13G0333 1200 399 44.6 6.4 Cyto No found/GH_A13G0375 -/100
GhCYP-38 Gh_A13G0846 525 174 18.8 7.8 Cyto Gohir.A13G103900/GH_A13G1226 100/100
GhCYP-39 Gh_D01G0026 675 224 24.6 7.3 Cyto Gohir.D01G002600/GH_D01G0028 100/100
GhCYP-40 Gh_D01G0030 516 171 18.2 7.4 Cyto Gohir.D01G003100/GH_D01G0033 99/99
GhCYP-41 Gh_D01G0206 780 259 28.1 10.3 Chlo Gohir.D01G020500/GH_D01G0221 100/100
GhCYP-42 Gh_D01G1605 522 173 18.3 8.5 Cyto Gohir.D01G156100/GH_D01G1877 100/100
GhCYP-43 Gh_D02G0593 705 234 26.3 9.8 Mito Gohir.D02G059200/GH_D02G0586 100/100
GhCYP-44 Gh_D02G1247 750 249 28.4 8.1 Chlo Gohir.D02G124600/GH_D02G1353 98/100
GhCYP-45 Gh_D02G2108 1233 410 46.4 8.6 Cyto Gohir.D02G212200/GH_D02G2325 100/99
GhCYP-46 Gh_D03G0186 1086 361 40.6 5.5 Cyto Gohir.D03G020200/GH_D03G0207 99/99
GhCYP-47 Gh_D03G1033 966 321 35.0 8.2 Chlo Gohir.D03G108800/GH_D03G1247 100/100
GhCYP-48 Gh_D04G1620 522 173 18.5 9.6 Cyto Gohir.D04G164700/GH_D04G1813 100/100
GhCYP-49 Gh_D04G1621 522 173 18.3 8.2 Cyto Gohir.D04G164800/GH_D04G1814 100/100
GhCYP-50 Gh_D04G1937 570 189 20.5 8.2 Cyto Gohir.D04G016300/GH_D04G0183 100/100
GhCYP-51 Gh_D05G0033 1836 611 70.6 6.0 Nucl Gohir.D05G003700/GH_D05G0030 100/100
GhCYP-52 Gh_D06G0456 870 289 31.9 7.3 Extra Gohir.D06G049100/GH_D06G0504 100/100
GhCYP-53 Gh_D06G2331 1491 496 55.9 8.1 Nucl Gohir.D06G084800/GH_D06G0925 100/100
GhCYP-54 Gh_D07G0381 2367 788 89.4 12.0 Nucl Gohir.D07G042100/GH_D07G0441 100/99
GhCYP-55 Gh_D07G0382 2406 801 90.5 11.5 Nucl Gohir.D07G042200/GH_D07G0442 98/97
GhCYP-56 Gh_D07G1064 1866 621 70.0 7.1 Cyto Gohir.D07G112300/GH_D07G1170 100/100
GhCYP-57 Gh_D07G2233 1359 452 49.8 4.9 Chlo Gohir.D07G226300/GH_D07G2429 100/99
GhCYP-58 Gh_D08G0452 711 236 26.7 9.5 Mito/Nucl Gohir.D08G050300/GH_D08G0461 100/100
GhCYP-59 Gh_D08G1359 768 255 27.5 8.4 Chlo Gohir.D08G143400/GH_D08G1489 89/88
GhCYP-60 Gh_D08G1477 483 160 17.4 7.8 Cyto Gohir.D08G154400/GH_D08G1612 99/99
GhCYP-61 Gh_D08G1766 1032 343 38.0 5.5 Extra Gohir.D08G182600/GH_D08G1902 100/100
GhCYP-62 Gh_D08G2018 1965 654 72.1 11.3 Nucl Gohir.D08G205800/GH_D08G2160 100/99
GhCYP-63 Gh_D09G0253 1311 436 48.1 4.7 Cyto Gohir.D09G025500/GH_D09G0307 100/100
GhCYP-64 Gh_D09G1874 1032 343 37.8 5.5 Extra Gohir.D09G191800/GH_D09G2069 100/100
GhCYP-65 Gh_D10G0925 1089 362 40.3 6.9 Cyto Gohir.D10G095600/GH_D10G1032 100/100
GhCYP-66 Gh_D10G1953 576 191 20.6 8.2 Cyto Gohir.D10G195800/GH_D10G2172 100/100
GhCYP-67 Gh_D10G2442 666 221 23.8 9.4 Cyto Gohir.D10G248100/GH_D10G2719 100/100
GhCYP-68 Gh_D11G0793 996 331 37.2 5.5 Extra Gohir.D11G079500/GH_D11G0807 100/100
GhCYP-69 Gh_D11G1133 705 234 26.7 8.9 Mito/Nucl Gohir.D11G113000/GH_D11G1161 100/100
GhCYP-70 Gh_D12G0709 210 69 7.5 9.1 Cyto/Nucl Gohir.D06G090500/GH_D06G0997 98/94
GhCYP-71 Gh_D12G0724 1791 596 65.4 8.2 Cyto/Nucl Gohir.D12G075500/GH_D12G0928 100/100
GhCYP-72 Gh_D12G0852 810 269 30.5 6.5 Cyto Gohir.D12G089100/No found 99/-
GhCYP-73 Gh_D12G2822 519 172 18.1 8.5 Cyto Gohir.D12G033300/GH_D12G0323 100/100
GhCYP-74 Gh_D13G0372 1212 403 45.4 7.2 Cyto Gohir.D13G036300/GH_D13G0367 100/100
GhCYP-75 Gh_D13G1093 525 174 18.8 7.4 Cyto Gohir.D13G107100/GH_D13G1170 100/100
GhCYP-76 Gh_Sca004717G03 1377 458 49.9 6.8 Chlo Gohir.D11G293200/GH_A11G3184 100/99
GhCYP-77 Gh_Sca004717G12 1377 458 49.9 5.9 Chlo Gohir.D11G296300/GH_D11G3210 100/100
GhCYP-78 Gh_Sca004880G02 780 259 28.1 10.5 Chlo Gohir.A01G022000/GH_A01G0230 100/99
GhCYP-79 Gh_Sca006066G02 513 170 18.6 9.4 Cyto/Nucl Gohir.D01G194000/GH_D01G2301 100/100