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Table 3 QTL for flesh color (fc), flesh extract color (fec) and flesh chlorophyll content (fcc) detected with two F2 populations (9110Gt × PI183967) in two experiments (SY2016W: Sanya 2016 winter, BJ2017F: Beijing 2017 fall)

From: QTL mapping and genome-wide association study reveal two novel loci associated with green flesh color in cucumber

Populations Environments Consensus Supporting Chr QTL peak Peak LOD 1.5 LOD interval Phenotypic
   QTL QTL   (cM) score left (cM) right (cM) variation (%)
234 F2 SY2016W qgf5.1 fc_5.1 5 SSR18729 (5.7) 27.2 SSR13340 (0.0) SSR14611 (6.9) 38.3
  fec_5.1 5 SSR13340 (0.0) 10.1 SSR13340 (0.0) SSR18729 (5.7) 22.2
  fcc_5.1 5 SSR07284 (0.9) 14.6 SSR13340 (0.0) SSR14269 (3.3) 23.9
125 F2 BJ2017F qgf5.2 fc_5.2 5 SSR16032 (23.7) 19.3 SSR14611 (20.1) SSR07284 (28.5) 57.6
  fec_5.2 5 SSR16691 (22.5) 29.5 SSR14611 (20.1) SSR07284 (28.5) 63.9
  fcc_5.2 5 c5.loc22 (22.0) 21.0 SSR17464 (15.8) SSR07284 (28.5) 49.1