Skip to main content

Table 1 Significant KEGG pathways (corrected P-value ≤0.01) of differentially expressed genes (DEGs) in ‘Zibao’ peel and female flower tissues following light deprivation

From: Differential color development and response to light deprivation of fig (Ficus carica L.) syconia peel and female flower tissues: transcriptome elucidation

Pathway

DEGs with pathway annotationa

All genes with pathway annotation

P-value

Corrected P-value

Pathway ID

T4-P vs. T4-F

 1 Flavonoid biosynthesis

18

52

3.39E-20

4.34E-18

ko00941

 2 Phenylpropanoid biosynthesis

16

182

5.70E-10

3.65E-08

ko00940

 3 Ubiquinone and other terpenoid-quinone biosynthesis

9

78

4.39E-07

1.87E-05

ko00130

 4 Drug metabolism - cytochrome P450

7

89

8.44E-05

0.002306851

ko00982

 5 Phenylalanine metabolism

7

90

9.01E-05

0.002306851

ko00360

 6 Circadian rhythm - plant

5

41

0.000136246

0.00249136

ko04712

 7 Stilbenoid, diarylheptanoid and gingerol biosynthesis

4

28

0.000379383

0.006070124

ko00945

 8 Metabolism of xenobiotics by cytochrome P450

6

88

0.000557625

0.007930668

ko00980

T4-P vs. LD-P

 1 Flavonoid biosynthesis

22

52

2.61E-11

6.96E-09

ko00941

 2 Phenylpropanoid biosynthesis

28

182

9.31E-06

0.001243105

ko00940

 3 Protein processing in endoplasmic reticulum

38

318

5.05E-05

0.002694049

ko04141

 4 Plant hormone signal transduction

29

227

0.000135188

0.006015865

ko04075

T4-F vs. LD-F

 1 Protein processing in endoplasmic reticulum

36

318

4.70E-06

0.000872223

ko04141

 2 Plant hormone signal transduction

28

227

1.28E-05

0.000872223

ko04075

  1. T4-P peel at stage T4, T4-F female flower tissue at stage T4, LD-P stage 4 peel following light-deprivation treatment, LD-F stage 4 female flower tissue following light-deprivation treatment
  2. a FDR < 0.05 and absolute value of log2 ratio ≥ 2 (2-fold) as the threshold