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Table 3 Differentially expressed genes involved in fatty acid and triacylglycerol biosynthesis

From: RNA-seq data reveals a coordinated regulation mechanism of multigenes involved in the high accumulation of palmitoleic acid and oil in sea buckthorn berry pulp

Function

Enzyme

Unigene name

Description

Abbr.

Fatty acid biosynthesis

acetyl-CoA carboxylase

ACC

c103701_g1_i1, c135286_g1_i2

long-chain acyl-CoA synthetase

ACSL

c128996_g1_i1, c147409_g1_i3, c128996_g1_i1, c144079_g1_i3, c141518_g1_i4, c144079_g1_i3, c251011_g1_i1, c136897_g1_i3

delta9-ACP desaturase

ACP-Δ9D

c108934_g1_i3, c129231_g1_i1, c129231_g1_i2, c139467_g4_i2, c139467_g4_i3, c139467_g4_i4

delta9-CoA desaturase

CoA-Δ9D

c119361_g2_i1, c141805_g5_i1, c99943_g1_i2

3-ketoacyl-ACP synthase II

KAS II

c147281_g2_i4, c147281_g2_i3

3-ketoacyl-ACP reductase

KAR

c74284_g1_i1, c129736_g2_i1, c119073_g1_i1, c89810_g1_i1, c74284_g1_i1

fatty acid elongation 1

FAE1

c120999_g2_i1

3-ketoacyl-ACP synthase III

KAS III

c142490_g1_i1

enoyl-ACP reductase

EAR

c68113_g1_i1

fatty acyl-ACP thioesterase A

FATA

c141493_g1_i2

fatty acid desaturase 2

FAD2

c129094_g1_i1, c108838_g1_i1

fatty acid desaturase 3

FAD3

c146563_g1_i2

fatty acid desaturase 7

FAD7

c136784_g1_i3, c136784_g1_i5, c68263_g1_i1, c136784_g2_i5

fatty acid desaturase 8

FAD8

c136784_g2_i1, c136784_g2_i4, c136784_g2_i2

3-ketoacyl-CoA synthase

KCS

c127448_g1_i1, c144156_g2_i1, c144156_g3_i1, c108825_g1_i1, c144156_g3_i2, c133459_g1_i2, c144156_g2_i2

mitochondrial trans-2-enoyl-CoA reductase

MECR

c128870_g1_i2

long-chain-3-hydroxyacyl-CoA dehydratase

PAS2

c129950_g1_i2, c138653_g1_i3, c138653_g1_i2

long-chain enoyl-CoA reductase

CER10

c144040_g1_i1

acyl-CoA oxidase

ACOX

c145203_g1_i3, c126961_g1_i2, c145203_g1_i1, c142258_g1_i1, c145203_g1_i2

acetyl-CoA acyltransferase 1

ACAA1

c118938_g1_i1

TAG biosynthesis

alcohol dehydrogenase

adh

c81969_g1_i1, c144472_g1_i1, c134965_g1_i1, c281911_g1_i1, c144736_g1_i1

aldehyde dehydrogenase

adhE

c124326_g1_i1, c141482_g2_i6, c141482_g2_i2, c119206_g1_i1, c133702_g1_i1, c124761_g1_i1, c133123_g1_i1, c106355_g1_i1, c144329_g2_i1, c174192_g1_i1, c225983_g1_i1

diacylglycerol O-acyltransferase 1

DGAT1

c144982_g1_i2

diacylglycerol kinase

DGK

c134987_g1_i3, c141410_g1_i7, c142032_g1_i4, c142032_g1_i2, c134987_g3_i1

1,2-diacylglycerol 3-beta-galactosyltransferase

MGD

c124343_g1_i1

alpha-galactosidase

GLA

c125189_g1_i1

glycerol-3-phosphate acyltransferase

GPAT

c131894_g1_i1, c138865_g2_i1, c131644_g1_i1, c4490_g1_i1, c127068_g1_i1

phosphatidate phosphatase

LPIN

c141781_g2_i2, c146679_g2_i8, c146679_g2_i7, c143717_g1_i3

lysophospholipid acyltransferase

LPAT

c129657_g2_i1, c129657_g2_i2

acylglycerol lipase

MGL

c119722_g1_i2

1-acyl-sn-glycerol-3-phosphate acyltransferase

plsC

c143245_g2_i1

glycerol-3-phosphate dehydrogenase

GPD1

c145910_g1_i1, c138230_g1_i3, c121789_g1_i1, c278707_g1_i1, c71276_g1_i1, c138230_g1_i1

phosphatidylglycerol phospholipase C

plcC

c140114_g1_i1, c126915_g1_i1, c140382_g1_i1, c137829_g1_i5, c137829_g1_i2

phospholipase D1/2

PLD1_2

c146964_g1_i5, c133909_g1_i1, c146964_g1_i11, c133909_g1_i2, c146964_g1_i10, c146964_g1_i3, c146964_g1_i7, c146964_g1_i6, c146964_g1_i8

phospholipid:diacylglycerol acyltransferase

PDAT

c133634_g3_i4, c133634_g3_i6, c133634_g3_i7, c133634_g3_i1

phosphatidyl glycerophosphatase

GEP4

c138502_g1_i3

phosphoethanolamine N-methyltransferase

NMT

c133930_g1_i1

glycerophosphocholine phosphodiesterase

GPCPD1

c126428_g1_i4

lysophospholipase II

LYPLA2

c144211_g2_i4

ethanolamine phosphotransferase

EPT1

c146531_g1_i3

CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase

PGS1

c139239_g1_i6, c139239_g1_i9

phosphatidylserine synthase 2

PTDSS2

c147897_g1_i8, c147897_g1_i7, c147897_g1_i6, c147897_g1_i4, c147897_g1_i1, c147897_g1_i2

  1. Significant DEGs were identified based on a log2 (fold change) > 1 and a p value < 0.05