Skip to main content

Advertisement

Table 3 Differentially expressed genes involved in fatty acid and triacylglycerol biosynthesis

From: RNA-seq data reveals a coordinated regulation mechanism of multigenes involved in the high accumulation of palmitoleic acid and oil in sea buckthorn berry pulp

Function Enzyme Unigene name
Description Abbr.
Fatty acid biosynthesis acetyl-CoA carboxylase ACC c103701_g1_i1, c135286_g1_i2
long-chain acyl-CoA synthetase ACSL c128996_g1_i1, c147409_g1_i3, c128996_g1_i1, c144079_g1_i3, c141518_g1_i4, c144079_g1_i3, c251011_g1_i1, c136897_g1_i3
delta9-ACP desaturase ACP-Δ9D c108934_g1_i3, c129231_g1_i1, c129231_g1_i2, c139467_g4_i2, c139467_g4_i3, c139467_g4_i4
delta9-CoA desaturase CoA-Δ9D c119361_g2_i1, c141805_g5_i1, c99943_g1_i2
3-ketoacyl-ACP synthase II KAS II c147281_g2_i4, c147281_g2_i3
3-ketoacyl-ACP reductase KAR c74284_g1_i1, c129736_g2_i1, c119073_g1_i1, c89810_g1_i1, c74284_g1_i1
fatty acid elongation 1 FAE1 c120999_g2_i1
3-ketoacyl-ACP synthase III KAS III c142490_g1_i1
enoyl-ACP reductase EAR c68113_g1_i1
fatty acyl-ACP thioesterase A FATA c141493_g1_i2
fatty acid desaturase 2 FAD2 c129094_g1_i1, c108838_g1_i1
fatty acid desaturase 3 FAD3 c146563_g1_i2
fatty acid desaturase 7 FAD7 c136784_g1_i3, c136784_g1_i5, c68263_g1_i1, c136784_g2_i5
fatty acid desaturase 8 FAD8 c136784_g2_i1, c136784_g2_i4, c136784_g2_i2
3-ketoacyl-CoA synthase KCS c127448_g1_i1, c144156_g2_i1, c144156_g3_i1, c108825_g1_i1, c144156_g3_i2, c133459_g1_i2, c144156_g2_i2
mitochondrial trans-2-enoyl-CoA reductase MECR c128870_g1_i2
long-chain-3-hydroxyacyl-CoA dehydratase PAS2 c129950_g1_i2, c138653_g1_i3, c138653_g1_i2
long-chain enoyl-CoA reductase CER10 c144040_g1_i1
acyl-CoA oxidase ACOX c145203_g1_i3, c126961_g1_i2, c145203_g1_i1, c142258_g1_i1, c145203_g1_i2
acetyl-CoA acyltransferase 1 ACAA1 c118938_g1_i1
TAG biosynthesis alcohol dehydrogenase adh c81969_g1_i1, c144472_g1_i1, c134965_g1_i1, c281911_g1_i1, c144736_g1_i1
aldehyde dehydrogenase adhE c124326_g1_i1, c141482_g2_i6, c141482_g2_i2, c119206_g1_i1, c133702_g1_i1, c124761_g1_i1, c133123_g1_i1, c106355_g1_i1, c144329_g2_i1, c174192_g1_i1, c225983_g1_i1
diacylglycerol O-acyltransferase 1 DGAT1 c144982_g1_i2
diacylglycerol kinase DGK c134987_g1_i3, c141410_g1_i7, c142032_g1_i4, c142032_g1_i2, c134987_g3_i1
1,2-diacylglycerol 3-beta-galactosyltransferase MGD c124343_g1_i1
alpha-galactosidase GLA c125189_g1_i1
glycerol-3-phosphate acyltransferase GPAT c131894_g1_i1, c138865_g2_i1, c131644_g1_i1, c4490_g1_i1, c127068_g1_i1
phosphatidate phosphatase LPIN c141781_g2_i2, c146679_g2_i8, c146679_g2_i7, c143717_g1_i3
lysophospholipid acyltransferase LPAT c129657_g2_i1, c129657_g2_i2
acylglycerol lipase MGL c119722_g1_i2
1-acyl-sn-glycerol-3-phosphate acyltransferase plsC c143245_g2_i1
glycerol-3-phosphate dehydrogenase GPD1 c145910_g1_i1, c138230_g1_i3, c121789_g1_i1, c278707_g1_i1, c71276_g1_i1, c138230_g1_i1
phosphatidylglycerol phospholipase C plcC c140114_g1_i1, c126915_g1_i1, c140382_g1_i1, c137829_g1_i5, c137829_g1_i2
phospholipase D1/2 PLD1_2 c146964_g1_i5, c133909_g1_i1, c146964_g1_i11, c133909_g1_i2, c146964_g1_i10, c146964_g1_i3, c146964_g1_i7, c146964_g1_i6, c146964_g1_i8
phospholipid:diacylglycerol acyltransferase PDAT c133634_g3_i4, c133634_g3_i6, c133634_g3_i7, c133634_g3_i1
phosphatidyl glycerophosphatase GEP4 c138502_g1_i3
phosphoethanolamine N-methyltransferase NMT c133930_g1_i1
glycerophosphocholine phosphodiesterase GPCPD1 c126428_g1_i4
lysophospholipase II LYPLA2 c144211_g2_i4
ethanolamine phosphotransferase EPT1 c146531_g1_i3
CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase PGS1 c139239_g1_i6, c139239_g1_i9
phosphatidylserine synthase 2 PTDSS2 c147897_g1_i8, c147897_g1_i7, c147897_g1_i6, c147897_g1_i4, c147897_g1_i1, c147897_g1_i2
  1. Significant DEGs were identified based on a log2 (fold change) > 1 and a p value < 0.05